Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq689 140 5e-31
>seq689
Length=39137
Score = 140 bits (154), Expect = 5e-31
Identities = 113/133 (85%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCG-CGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAG 59
||||||||||||||| | | |||||| ||||||||| || || || |||| ||||||
Sbjct 31705 GTACGAGAGGAACCGTCTG--TTCAGA-TAATTGGTTCATGGGGTTGCCTGAAAAGGCAG 31649
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 31648 TGCCCCGAAGCTACCATCTGTAGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCT 31589
Query 120 AGAACGGGGTGAT 132
||| | | ||||
Sbjct 31588 GGAAAGCGTTGAT 31576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819127417344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |