Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq689 587 2e-165 >seq689 Length=39137 Score = 587 bits (650), Expect = 2e-165 Identities = 440/513 (86%), Gaps = 10/513 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| | |||||| || ||||| | | |||||||||||||||||||| Sbjct 36714 GTACTCATTCCTAGAGCAAGACTATGAATAGCCCCGCTTAAGTATTTATTGTCACTACCT 36773 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 36774 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 36833 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| ||||||| || |||||||| Sbjct 36834 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTAATGCCATGGTA 36893 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || ||||||||||| || |||||||||||||| |||||||| ||||| | | Sbjct 36894 GGCCAATACCCTACCATCGACAGCTGATAGGGCAGAAACTTGAATGATTCATCGTCACCA 36953 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGA--GCCCCGAAGGGCGTT 297 ||||| ||| ||||||| |||||||||||| |||||| | | |||| ||| || || Sbjct 36954 CAAGGGCATACGATTCGCAAAGTTATTATGATTCACCACAATACCGCCCGAAAGCGCATT 37013 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC------GAAGTCGGGGTTTTTAGCATGTAT 351 || ||| ||||||||||||||| ||| ||| | ||| ||| || |||||||| Sbjct 37014 GG-TTTCTATCTAATAAATACATCCCGTCCGCGCAAGCAGTTGGGAATTAACGCATGTAT 37072 Query 352 TAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTG 411 ||||||||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| Sbjct 37073 TAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAAATACTATCAAATAAACTATAACTG 37132 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 || ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||| Sbjct 37133 ATATAATGAGCCATTCGCAGTTTCACAGTATAAATTGTTTATACTTAGACATGCATGGCT 37192 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| ||||||||||||||| Sbjct 37193 TAATCTTTGAGACAAGCGTATGACTACTGGCAG 37225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510261858816