Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1850 288 3e-75 >seq1850 Length=505 Score = 288 bits (318), Expect = 3e-75 Identities = 279/353 (79%), Gaps = 12/353 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| |||||||| |||||| |||| | |||||||||||||| ||||| Sbjct 343 CTTTTGTTCTACATGAGATTTCCGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 284 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| |||| | || | | || Sbjct 283 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTTTGTCTTACACGCAGGTC 224 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCC-GCTTCATTG 185 || |||| |||| | |||| | | ||| | | || || | || Sbjct 223 CTCC---GAAGAG--TTAATACAAGAACCAGTACCA--AAGGCACGGCCCTGCCTAATGT 171 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245 | | |||||| || ||| ||||||||||||||| ||||||| |||||||| | Sbjct 170 AATGAGTAAACTCACTCCAAGAGTAGTGGTATTTCACGATCGCCGAA---GCTCCCACCT 114 Query 246 ATT-CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304 || |||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct 113 ATAACTACACCTCTTAGGTGAGTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 54 Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 53 TCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635084097024