Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 3_20[genbank_20GCA_5F900128585.1_202016-12-02] 7,088 sequences; 28,414,174 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3675 172 4e-38 seq3919 163 2e-35 >seq3675 Length=4586 Score = 172 bits (190), Expect = 4e-38 Identities = 1161/1832 (63%), Gaps = 72/1832 (4%) Strand=Plus/Minus Query 65123 TAGTACATGCCGGTCTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTT 65182 |||||||| ||||| || || || ||| || || || ||||| || | || ||| Sbjct 2432 TAGTACATACCGGTTTTAAGACCCTTCTTCCAGGCGTAAAAGTGCATTGAGGTCAACTTT 2373 Query 65183 GCATAATTCGGCTCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCA 65242 | || |||| | |||| ||||| ||||| || |||||| | |||| Sbjct 2372 CCGGTGGAGGGGGCGGCGATGTGCACGTTCAAACTTTGACTTTGGTCGATGAATGCACCA 2313 Query 65243 CGATCTGCAGCCATGTCAATGATACGACGTCCCGAT-ATCTCCCAGACGGTCTTGTACAG 65301 || ||||| |||||| || |||| | | | | | || |||||||||||||||||||| Sbjct 2312 CGGTCTGCGGCCATGGTAAGGATA-GTCTTTTGGCTGATTTCCCAGACGGTCTTGTACAG 2254 Query 65302 G-CGACGTACCTCAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAA 65360 | |||| | | |||| ||| || || || || || || | | ||||| | Sbjct 2253 ATCTTTGTACTGCT-TGGGAAGGCCCTTAACGTTTTGAACAGATCCTCCATCGGCAATGA 2195 Query 65361 TGCGATTACGCATCGACTCTGA-CCACAAACCCAAATCGATAAGATGTTGAACCAAGTGA 65419 | | || |||| || | | ||| | ||| |||| | | | | |||||| Sbjct 2194 TCTGGTTGCGCA-CGCTTGGGGTCCAGATGTTCAACGCGATCAAGTCACGCAACAAGTGC 2136 Query 65420 CGATTGATG-ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGAT 65478 |||| | || | ||||| || | || ||||| | | || ||||||| |||| Sbjct 2135 TTGTTGACGCACGTA-AACTCTCCTGCAAGCACACGTCTGTTGTACATGTTGGTCGTGTA 2077 Query 65479 GGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538 ||||| ||| |||| |||| || | |||||| | || || || || ||||| || || Sbjct 2076 TGGTTCGAAGCATTCGTTGTTTCCCATAATTTGTGAGGTCGAGGCCGTCGGCATTGGCGC 2017 Query 65539 GACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTT 65598 ||| | ||| ||||| || | |||| | | | | ||| || | ||| |||||| Sbjct 2016 GACGAGCAACGAGTTGCGTACGCCGTGCTTGGCGACATTGGCGCGAAGTTCCGCCCAGTC 1957 Query 65599 CCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GA 65654 ||| ||||| ||| | | ||| |||||| ||| |||| | | | || || Sbjct 1956 CCA--TCGGTC---CGTTGGGGTA-ACGTTCCACATGTCCGGTTGGAAGATGCCTTTGGA 1903 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCC------TCCTCCT--TGGCAAG 65706 ||||| | | || || | | ||||| ||| || ||| | ||||| Sbjct 1902 GACTGGACAG----CCTGGGTAGGTCTCGTAGTGTCCGAAGCGTTCGGCCTCCTCGCAAG 1847 Query 65707 TTGACAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATG-CGTCGATTAAGTT 65765 || || |||| | ||||| || || ||||| ||||| || | | | | || || Sbjct 1846 ---AC-GC-GGTC---ATCGCGGCGAAGTACATGGTTTCGAATATCTCCTTGTTCAA-TT 1796 Query 65766 CACGTGCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTT 65825 || ||||| ||||| ||| | || | | ||||| | || | |||||| || |||| Sbjct 1795 GTCGGGCCTCTTCGCTTTCGAATGGAAAGCGCATCAAAATGAACGCGTCGGCAAGCCCTT 1736 Query 65826 GAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGT 65885 | || || | || || || || || |||| |||||| | ||||| || |||| Sbjct 1735 GGACGCCCAGCCCAATTGGGCGGTGGCGCATATTGGAGTAGCGAGCCTCCTCCACTGGGT 1676 Query 65886 AGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCA 65945 |||| |||| ||||| | || ||||| ||| ||||| | || | | ||| | Sbjct 1675 AGTAGTTGACGTCGATGACACGGTTCAAGTTGACGGTCACGGTTTTAACAACA--TCG-A 1619 Query 65946 ATTGTTCGAAATCAAAATGTTTAGGACGATCGGGAGT----GCCGGACACCACAAACTTG 66001 | || | | ||| | || | | || || || |||| ||||| Sbjct 1618 ACAGTGCCTTGTG-----GTT--GTACACTGGCTTGTCGCCGCTGGTGTCCACGAACTTT 1566 Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || | | | || || | |||||| || || |||||||| || || || |||| || Sbjct 1565 GGCAAGCAGATGGACGCCAAGTTGCAAACGGCAATCTCGTCCGGGGCAGTGTACTGGATG 1506 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||||| ||||| | || || ||||| || || || || || ||||| Sbjct 1505 ATCTCCGTGCACAAGTTACTCGATTTAATAGTTCCCAAGTTTTGCTGGTTGCTTTTGCGG 1446 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| | |||||||| | ||||||||| || ||||| || ||||| |||| ||| Sbjct 1445 TTGCAAGAGTCCTTGTAGAGCATGTACGGTGTTCCGGTTTCTACTTGACTTTCAAGGATT 1386 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTT-TGCGTTCGTAATG 66240 | ||| | | | || | || | | | | || | ||| | |||| | Sbjct 1385 TTGAACCACAATTCCTGGGCGCGGATGGTCTTGAACCCTTTGCCCTCTGCCT-CGTACTT 1327 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAG---ACATGGACACTTGTG 66297 |||| | | |||||| || ||||| |||| ||| || || ||| | || Sbjct 1326 GGCGTACAAGGTTTCGAACTCCTCGCCCCAGGTTTCGTGCAGGTTACG-GGCCACGT-TG 1269 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 ||||| | || | ||| | || || | ||| || ||| || || || || || Sbjct 1268 -GGACAGAACAAGGTCCACTGCCCGTCGGACTGTACGCGCTTCATGAAAAGGTCTGGGAT 1210 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGT---TGCTCCTCAATGCCGTGATTTTTGCG 66414 ||| | |||||||| || ||||| || || | ||| ||| ||||| ||||| Sbjct 1209 CCACATCGCGTAGAACAGGTCGCGGGCGCGGGCGTTCTCGTCA---CCGTGGTTTTTCTT 1153 Query 66415 CAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCC 66474 ||| || | ||||||||| | ||| || ||||| || || ||||| |||||||||||||| Sbjct 1152 CAAATCCAAGAACTCAAAAACGTCCGCGTGCCACGGCTCAAGGTACATGGCGAACGAGCC 1093 Query 66475 CATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACAT 66534 | | || ||||| || |||||||||||||| || ||| | ||||||||| |||| ||| Sbjct 1092 CTTGCGCTTGCCTCCGCCTTGGTCGACGTACCGTGCGGTGTCGTTGAAGACGCGCAGCAT 1033 Query 66535 CGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTAT 66594 || | || ||||| || |||||||| ||| | ||| | | || || Sbjct 1032 GGGGATGATGCCGTTGCTGGAACCGTTGGTGCCCCGAATGTAGCTGCCTTGGGAGCGAAT 973 Query 66595 ATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCAC 66654 |||| | ||||| || || ||||| ||| |||| || || || Sbjct 972 GCCGTGGATGGATAGACCGATGCCCCCGGCGTACTTGCTGATGCAGGCGCAGGACTTCAA 913 Query 66655 TGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAG 66714 || | | || || || ||| ||| |||| |||||||| | | |||| || || Sbjct 912 GGTGTCGTAGATCCCTTCGATGCTGTCGTCCTTCATGGTCAGCAAGAAGCACGAGGCGAG 853 Query 66715 TTG-GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA-ATGG 66772 || ||| |||| || |||| ||||||||| || || ||||| || ||||| ||| Sbjct 852 CTGCGGGCGTGGG-GTCCCGGCGTTGAAGAGGGTCGGCGTGGCGTGAGTGAAGTACATGT 794 Query 66773 CGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGT 66832 | ||| | ||||| |||||||| | || |||| | || || |||| Sbjct 793 TG-CTCATCAAGTTGTAGGTCTCGATCGCTCGCTCGATGTCCGCTTTGTGGATACCGATG 735 Query 66833 GCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAG 66892 | | ||||| || | || || || || ||||| | | | | ||||| | || | | Sbjct 734 GAAACGCGCATGAGCATGTGCTGCGGGCGCTCGACGATCTGGCCGTTGATCTTCAAAAGG 675 Query 66893 TAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 |||| | |||| ||| |||| || ||||| Sbjct 674 TAGGCCCTCTCCAAGGTTTTGAACCCGAAGTA 643 >seq3919 Length=4506 Score = 163 bits (180), Expect = 2e-35 Identities = 573/884 (65%), Gaps = 18/884 (2%) Strand=Plus/Plus Query 61054 CGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAA 61113 || ||||| |||||||| ||| || | | |||||||||| ||||||||||| || ||| Sbjct 514 CGATTCGTTTTGTTCCCGATCCAGCACAACGATATTTGGCAAATGTACAAAAAAGCTGAA 573 Query 61114 GCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGT 61173 || || |||||||| | ||| ||| | || ||| | |||||| || |||||||| | Sbjct 574 GCCTCGTTCTGGACTGCGGAAGAGCTGGACTTGGCACAAGACAGTAAAGACTGGGA---T 630 Query 61174 TTATCGAGCGGTGAAC-AAC---ATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTC 61229 | || ||| ||| ||| ||||| | | || |||| || || || || || Sbjct 631 AAAATGA-CGGACAACGAACGGTTCTTCATCAGCAACGTCCTGGCCTTTTTCGCAGCCTC 689 Query 61230 GGACGGTATCGTCAATGAGAATTTATTG--GAACGTTTCGCGCAGGAGGTGCAAGTGTCG 61287 ||||| || || || ||||| | ||| |||| ||| || | || || ||| || || Sbjct 690 TGACGGCATTGTAAACGAGAACCTGTTGATGAAC--TTCTCGAACGAAGTCCAACTGCCG 747 Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347 ||||| | || |||||||| |||||||| ||||| || || ||||| | || | ||| Sbjct 748 GAGGCAAGGTGCTTCTACGGGTTCCAGATAGCCATTGAAAACATCCACGCAGAAGTATAC 807 Query 61348 AGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCC 61407 | |||| || || |||||||| | | | ||| || | ||| | |||||| Sbjct 808 TCTCTTCTTATTGACACGTACATTAAAAATGGAAAAGAAAAGGATAGGTTGCTGAATGCC 867 Query 61408 ATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGG-GCCTTCAATTGGATCACCAG 61466 ||||| | || ||| | || || |||||| |||||| | |||| || | Sbjct 868 ATCGATAACATTGACATGGTCCGCCAAAAGGCCGATTGGTGCCTTCGA-TGGACCAACGC 926 Query 61467 TACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTT 61526 || || | |||| ||| | | | || || || | | |||||| | || || Sbjct 927 CGAAAATGCGTCGTTTGCCGAAAGGGTTGTAGCTTTCGCCGCGTGCGAGGGCATCTTCTT 986 Query 61527 CAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGAC 61586 || |||||| || | || ||||| ||||| || || | |||||||| || Sbjct 987 TTCCGGGTCGTTTTGTGCCGTGTTCTGGTTAAAGAAGCGGGGTTTGATGCCCGGCTTGTG 1046 Query 61587 CTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCT 61646 |||| ||| ||| | || |||||||||||| |||| |||||||| || ||||| Sbjct 1047 CTTCTCCAACGAGCTCATCAGCCGCGACGAGGGCTTGCACTGTGATTTCGCGTGCTTGCT 1106 Query 61647 ATTCAAACGCTATCTGGTGAAT--CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704 | ||| | | || | ||| ||| || | | || | || || | | Sbjct 1107 GTACAAGGACCACTTGATAAATAAACTCCCTC--AACAACGCATTCACGATATCATCGGG 1164 Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764 | || || |||||| | | || || | | || |||||||| | | || || Sbjct 1165 AACGCTGTGGACATCGAAAAAGTTTTCGTGTCCAAAGCATTGCCCGTGGAATTGATAGGG 1224 Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT 61824 ||||||| | |||| | || || || | || ||||| ||||||| | Sbjct 1225 ATGAATTCCACCTTGATGTGCGAATACATCGAGTACTGCGCAGACCGATTGTTGGTGGCC 1284 Query 61825 TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCG 61884 ||||| | | ||| || || | | || || ||||||| ||||| ||||| ||| Sbjct 1285 TTGGGGGTTGAAAAGATGTACAACGCAACCAATCCGTTTGATTGGATGGAAATGATATCG 1344 Query 61885 CTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 ||| | || ||||| |||||||| ||||| || ||||| || || Sbjct 1345 CTGCAAGGAAAGACCAATTTTTTTGAGAAGCGGGTAGGTGAGTA 1388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397533656088320