Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq3219 273 4e-71
>seq3219
Length=3450
Score = 273 bits (302), Expect = 4e-71
Identities = 212/246 (86%), Gaps = 5/246 (2%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGG 132
|||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||||||
Sbjct 241 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCATTTGCTGTGAATACATTAGCATGG 300
Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192
||||||| ||||||| | ||| |||||||||||||| ||| || ||||||||||
Sbjct 301 AATAATAAGATAGGACTTT-GGTACTATTTTGTTGGTTGG-AGG-CCAAGGTAATGATTA 357
Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252
||||||||||| |||||| | |||| ||||||||||||||||||||||||||||||
Sbjct 358 ATAGGGATAGTTGGGGGTATTCATATTTAATTGTCAGAGGTGAAATTCTTGGATTTATGA 417
Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||| |||| ||||||||| || ||||||||||||||||||||||| ||||||||||
Sbjct 418 AAGATGAACTTATGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 476
Query 313 TAGGGG 318
||||||
Sbjct 477 TAGGGG 482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915142928128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |