Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq3219 300 7e-79
>seq3219
Length=3450
Score = 300 bits (332), Expect = 7e-79
Identities = 239/283 (84%), Gaps = 10/283 (4%)
Strand=Plus/Plus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||||||||| | ||||||| |||||||| ||||||
Sbjct 2592 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATATGTGCGAGTATTTGGGTGGCAAACC 2651
Query 468 CGTGC-GCGTAATGAAAGTGAACGGAGGTGGGAACCC----GTGAGGGTG-CACCATCGA 521
| | ||||||||||||| || ||||| ||| | ||| ||| || ||||||
Sbjct 2652 CATAATGCGTAATGAAAGTAAA---AGGTGTGAAACATTCTNTGAATGTGGCAACATCGA 2708
Query 522 CCGATCCTGATG-TCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580
|||| | |||| ||| || | ||||||| ||||||||| |||||||||||||||||
Sbjct 2709 CCGACCATGATCCTCTGGTGAAAGGTTTGAGTTAGAGCATAGATGTTGGGACCCGAAAGA 2768
Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640
||||||||||||||||| ||||| |||||||| |||||| |||||||||||||| ||||
Sbjct 2769 TGGTGAACTATGCCTGAGTAGGGCGAAGCCAGGGGAAACCCTGGTGGAGGCTCGAAGCGA 2828
Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2829 TTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 2871
Score = 215 bits (238), Expect = 2e-53
Identities = 155/179 (87%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 25 TGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTT 84
||| || | |||| |||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 2118 TGACGCGCTTTCGTCGAGTCGAGTTGCTTGGGAATGCAGCTCTAAATGGGTGGTAAATTC 2177
Query 85 CTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATG 144
| ||||||||||||||||||| ||||||||||| | ||||||| |||| ||||||||
Sbjct 2178 CATCTAAAGCTAAATATTGGCGTGAGACCGATAGNGAACAAGTACCGTGAGGGAAAGATG 2237
Query 145 AAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203
||||| |||||| |||||||||||||||| || |||||||| | |||||||| || |||
Sbjct 2238 AAAAGAACTTTGAAAAGAGAGTTAAAAAGTACTTGAAATTGCTAAAAGGGAACCGATTG 2296
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079866237800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |