Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq137 84.2 3e-14 >seq137 Length=16762 Score = 84.2 bits (92), Expect = 3e-14 Identities = 155/228 (68%), Gaps = 26/228 (11%) Strand=Plus/Minus Query 14 CACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTT 73 |||||||||||||||||||| ||||| || |||| || || ||| |||||||||||| Sbjct 2044 CACCGGGCAGGCGTCAGTCCCTATACTTCATCTTA-CGATTTTGCAGAGACCTGTGTTTT 1986 Query 74 TAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCAC 133 || |||||||||||| | ||||| | || ||| | || Sbjct 1985 TATTAAACAGTCGCTATCTCCTATTTTATG--------------TCA------CCTT--- 1949 Query 134 CAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACA 193 | | ||||| | || |||| ||||||| | | || |||||||| |||||| | || | Sbjct 1948 -ACAAAAGGCACTCTTTATCCCAAAGTTACAGAGTCAATTTGCCGAGTTCCTTCAACATA 1890 Query 194 GTTCACCCGAACGCCTTAGTA-TTCTCTACCTGACCACCTGTGTCGGT 240 || | | | |||||||||| | | ||| | |||||||||||| Sbjct 1889 ATTATCTCAAGCGCCTTAGTACATTTATACTTATTTACCTGTGTCGGT 1842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694358050428