Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq137 93.3 4e-17 >seq137 Length=16762 Score = 93.3 bits (102), Expect = 4e-17 Identities = 109/148 (74%), Gaps = 7/148 (5%) Strand=Plus/Plus Query 49 AATATACTAAGGCGCTTGAGTGAATCACGGTTAAGGAACTAGGCAAACTGACCCTGTAAC 108 ||| |||||||||||||||| ||| | | | |||||||| |||||| |||| ||||||| Sbjct 1865 AATGTACTAAGGCGCTTGAGATAATTATGTTGAAGGAACTCGGCAAATTGACTCTGTAAC 1924 Query 109 TTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAGAGAATAGGTCCAGGCAACT 168 || ||||||||| || ||| || ||| || | |||||| || ||| Sbjct 1925 TTTGGGATAAAGAGTGCCT-------TTTGTAAGGTGACATAAAATAGGAGATAGCGACT 1977 Query 169 GTTTAACAAAAACACAGGGCTGTGCCAA 196 |||||| ||||||||||| || ||| || Sbjct 1978 GTTTAATAAAAACACAGGTCTCTGCAAA 2005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531167909544