Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq137 210 6e-52 >seq137 Length=16762 Score = 210 bits (232), Expect = 6e-52 Identities = 211/274 (77%), Gaps = 9/274 (3%) Strand=Plus/Minus Query 6 ATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGC 65 |||| | |||||||||| | |||||||||||| ||||| | | ||||||||| | Sbjct 2236 ATACTCCGCATCTTCACGGACATTTCAATTTCATTGAGTTTATGTTGGAGACAGTGAGAA 2177 Query 66 CATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||| Sbjct 2176 AGTCGTTACGCCATTCATGCAGGACGGAACTTACCCGTCAAGGAATTTTGCTACCTTAGG 2117 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAA 185 ||||| | ||||| |||||||||||| | |||| | | | | |||| | | | Sbjct 2116 ACCGTCAGAGTTACAGCCGCCGTTTACGAGAGCTTAGTTTCAAA-----GCGTAAACAAT 2062 Query 186 CCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245 | || ||||| || ||||||||||||||||| |||||||| || ||| || Sbjct 2061 TC----CACTTAACTTTTTCGCACCGGGCAGGCGTCAGTCCCTATACTTCATCTTACGAT 2006 Query 246 TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| ||||||||||| ||||||||||| Sbjct 2005 TTTGCAGAGACCTGTGTTTTTATTAAACAGTCGC 1972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260721376512