Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq137 159 1e-36 >seq137 Length=16762 Score = 159 bits (176), Expect = 1e-36 Identities = 341/504 (68%), Gaps = 33/504 (7%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || ||||||||||||||||||||| | | ||||||||||||| Sbjct 3930 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGAGTTTGGAACAGCGGTGGAGCAT 3989 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||| ||||| ||||||||||| | ||| || | | Sbjct 3990 TTGGTTTAATTCGATAATACGCGGGAAACCTTACCAACTTTTGCTATTTT-------TTT 4042 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 || || | ||| || | | ||| ||||||| ||||||| ||||||||| Sbjct 4043 TA---TTAAATTTTT---ATTAAAGTAAAAGAAAAACAGGTGTTGCATGGCTGTCGTCAG 4096 Query 181 CTCGTGTCGTGAGAT-GTTGGGTTAAGTC--CCGCAACGAGCGCAACCCTTAAGCTTAGT 237 ||||||||||||||| | | |||||| || || |||||||| |||||||| ||||| Sbjct 4097 CTCGTGTCGTGAGATGGGTTGGTTAATTCCTCCATAACGAGCGTAACCCTTATTTTTAGT 4156 Query 238 TG------CCATCA------TTAAGTTGGGCA---CTCTAAGTTGACTGCCGGTGACAAA 282 || | | | ||||||| | || ||| ||| || ||| || Sbjct 4157 TGTTTAAAACTTTATTGTATTTAAGTTTTTAAATTCTTTAAAAAGACAGCTAATGA-AAG 4215 Query 283 CCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACG 342 |||||||| ||| ||||||| |||||||| |||||| |||||||||||||| Sbjct 4216 TTAGAGGAAGGCAAGGATCACGTCAAGTCATCATGGCCCTTACAGGTTGGGCTACACACG 4275 Query 343 TGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGT 402 ||||||||| | || |||| ||| | || |||||| |||| | Sbjct 4276 TGCTACAATAGGAAAGACAATAATAAGCAATTATTTGAATAATCGCAAAT-ATTTAAATT 4334 Query 403 TGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAAT 462 | | | || ||||| ||| ||| || ||| |||||| || |||||||||||||||| Sbjct 4335 TTCCTTAAATTTGGATTATAGGCTGTAATTCGCCTATATAAAATTGGAATCGCTAGTAAT 4394 Query 463 CGTAGATCAGCATGCTACGGTGAA 486 || | |||| || | | ||||||| Sbjct 4395 CGCAAATCATCACGTTGCGGTGAA 4418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503906210560