Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3219 293 4e-77 >seq3219 Length=3450 Score = 293 bits (324), Expect = 4e-77 Identities = 223/262 (85%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 986 TACTTGTTGGCTGAATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAG 927 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||| ||| | | ||| |||||||||||||| | | Sbjct 926 ACCTGTTATTGCCTCCAACTTCCCCTGGTTAAACACCAGGTGTCCCTCTAAGAAGTCGCC 867 Query 121 CACCAACCATAGTCGATGG----GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | ||| || | | ||| | |||||||| ||| ||||||||||||||| |||| Sbjct 866 GAGCAATCAAAAT-GATTCCCCTGACTATTTAGTAGGCGGAGGTCTCGTTCGTTAACGGA 808 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 807 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 748 Query 237 AAGAAAGAGCTATCAATCTGTC 258 ||||||||||| |||||||||| Sbjct 747 AAGAAAGAGCTGTCAATCTGTC 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796751864316