Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq5420 95.1 2e-17 seq3431 95.1 2e-17 seq258 95.1 2e-17 >seq5420 Length=1728 Score = 95.1 bits (104), Expect = 2e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT 85 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1674 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTT 1728 >seq3431 Length=756 Score = 95.1 bits (104), Expect = 2e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT 85 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 55 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTT 1 >seq258 Length=12308 Score = 95.1 bits (104), Expect = 2e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTT 85 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 12254 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTT 12308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854346719616