Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq137 82.4 3e-13 >seq137 Length=16762 Score = 82.4 bits (90), Expect = 3e-13 Identities = 119/167 (71%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201 || ||||| |||||| | |||||||||| || |||||||||| | |||||||||||| Sbjct 1161 ACTTAAATAGATTTCGCAAAAAACCAGCTATTACCAAGTTTGATTAGACTTTCACCCCTA 1102 Query 202 TCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT---CT 258 | | ||||| || | ||| |||| | ||| |||||||||||| || | | Sbjct 1101 ATTAGAAATCATCACCGCCTTTTGCAACAGACGTGTGTTCGGTCCTCC---CGTTTAATT 1045 Query 259 TACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 ||| ||||||||| | | |||||||||| | |||||||| Sbjct 1044 TACTAAACGTTCAACCTGTTCCTAACTAGATCACTTGGATTCGGGTC 998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817486654464