Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq137 187 7e-45 >seq137 Length=16762 Score = 187 bits (206), Expect = 7e-45 Identities = 206/267 (77%), Gaps = 12/267 (4%) Strand=Plus/Plus Query 235 GCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTG 294 |||||| ||||||||||||| |||||| |||| | |||||||||||| ||||||||| Sbjct 3383 GCCACACTGGAACTGAGACAAGGTCCAGACTC--AATTGAGGCAGCAGTGAGGAATATTG 3440 Query 295 CACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT-GAAGGC--CTTCGGGT 351 ||||||| | |||| ||||| |||||| | ||| || ||| || || ||| || Sbjct 3441 GACAATGGACGAAAGTCTGATCCAGCAAAACTACGTAAGTGATAGACAGCAACTT--AGT 3498 Query 352 CGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAAC 411 | |||||| | || |||| |||||| |||| || |||| | ||||||||||| || Sbjct 3499 TGAAAAGCTTTTTCATCAAAAAAGATAGTGACATTATTTGAAAAAGAAGCCCCGGCAAAT 3558 Query 412 TAC-GTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGC 470 | | |||||||||||||||||||||| ||||||| | ||||| || | ||| | ||| Sbjct 3559 TTCTGTGCCAGCAGCCGCGGTAATACAGAGGGGGCAGGTGTTATTCGTAGTTA-TTAGGC 3617 Query 471 GTAAAGGGTGCGTAGGTGGTTTCTTAA 497 ||||||||| |||| |||||||||| Sbjct 3618 GTAAAGGGTTCGTA---GGTTTCTTAA 3641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497506609664