Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq137 159 8e-37
>seq137
Length=16762
Score = 159 bits (176), Expect = 8e-37
Identities = 248/347 (71%), Gaps = 17/347 (5%)
Strand=Plus/Plus
Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC-GTGCCAGCAGCCGCGGTAATACGTAGGGGG 59
|| |||| | ||||||||||| || | | |||||||||||||||||||||| ||||||
Sbjct 3533 TATTTGAAAAAGAAGCCCCGGCAAATTTCTGTGCCAGCAGCCGCGGTAATACAGAGGGGG 3592
Query 60 CTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGG 119
| | ||||| || | ||| | |||||||||||| |||| |||||||||| | ||
Sbjct 3593 CAGGTGTTATTCGTAGTTATTAGGCGTAAAGGGTTCGTA---GGTTTCTTAACT-AGTTT 3648
Query 120 T---GAAAGGCTATGGCTCAACCCCGGGAC-TGCTTTTGAAACTGCAGGGCTAGAGTGCA 175
| |||| | | |||| ||| || | | |||| | | | ||| |||||| |
Sbjct 3649 TCTAAAAAGACCAAGGCTTAACTTTGGTTCATAGTTTTAACAGTTAAGG--TAGAGTTAA 3706
Query 176 GGAGGGGCAAGTG---GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAAC 232
| | ||| ||| ||||| || ||||| | | |||| ||||||| | |||
Sbjct 3707 GTAAGGG---GTGACAGAATTTTTAATGTAGAGATAAAATTTTATGATATTAAAAAGAAT 3763
Query 233 ACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGA 292
||| ||||||||||| || | || ||||||||||||| ||||||| | || |
Sbjct 3764 TTCAGAGGCGAAGGCGGTCACCTAGGCTTATACTGACACTGAGGAACGAAAGCATAGGTA 3823
Query 293 GCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339
|||||| |||||||| |||| ||||||| | || || ||||||||||
Sbjct 3824 GCAAACGGGATTAGAGACCCCGGTAGTCTATGCTGTCAACGATGAAT 3870
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203124968448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |