Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq137 159 8e-37 >seq137 Length=16762 Score = 159 bits (176), Expect = 8e-37 Identities = 248/347 (71%), Gaps = 17/347 (5%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC-GTGCCAGCAGCCGCGGTAATACGTAGGGGG 59 || |||| | ||||||||||| || | | |||||||||||||||||||||| |||||| Sbjct 3533 TATTTGAAAAAGAAGCCCCGGCAAATTTCTGTGCCAGCAGCCGCGGTAATACAGAGGGGG 3592 Query 60 CTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGG 119 | | ||||| || | ||| | |||||||||||| |||| |||||||||| | || Sbjct 3593 CAGGTGTTATTCGTAGTTATTAGGCGTAAAGGGTTCGTA---GGTTTCTTAACT-AGTTT 3648 Query 120 T---GAAAGGCTATGGCTCAACCCCGGGAC-TGCTTTTGAAACTGCAGGGCTAGAGTGCA 175 | |||| | | |||| ||| || | | |||| | | | ||| |||||| | Sbjct 3649 TCTAAAAAGACCAAGGCTTAACTTTGGTTCATAGTTTTAACAGTTAAGG--TAGAGTTAA 3706 Query 176 GGAGGGGCAAGTG---GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAAC 232 | | ||| ||| ||||| || ||||| | | |||| ||||||| | ||| Sbjct 3707 GTAAGGG---GTGACAGAATTTTTAATGTAGAGATAAAATTTTATGATATTAAAAAGAAT 3763 Query 233 ACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGA 292 ||| ||||||||||| || | || ||||||||||||| ||||||| | || | Sbjct 3764 TTCAGAGGCGAAGGCGGTCACCTAGGCTTATACTGACACTGAGGAACGAAAGCATAGGTA 3823 Query 293 GCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 |||||| |||||||| |||| ||||||| | || || |||||||||| Sbjct 3824 GCAAACGGGATTAGAGACCCCGGTAGTCTATGCTGTCAACGATGAAT 3870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203124968448