Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3219 298 1e-78 >seq3219 Length=3450 Score = 298 bits (330), Expect = 1e-78 Identities = 255/313 (81%), Gaps = 4/313 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCC---CGCTTTGGCGGGTCGCCGGCTTCT 76 || |||||||| ||| |||||||| |||| | |||| | ||| || ||||| Sbjct 817 GAACGAGACCTCCGCCTACTAAATAGTCAGGGGAATCATTTTGATTGCTCGGCGACTTCT 876 Query 77 TAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135 ||||||||| || | | || ||||||| ||||||||||||||||||||||||| Sbjct 877 TAGAGGGACACCTGGTGTTTAACCAGGGGAAGTTGGAGGCAATAACAGGTCTGTGATGCC 936 Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195 |||||||||||||||| |||||||||||||||||| ||||||| ||| || |||||| Sbjct 937 CTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATTCAGCCAACAAGTATATAACCTTG 996 Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255 ||||||||||||||||||||| | ||||| ||||||||||||||| ||||| |||| Sbjct 997 ACCGGAAGGTCTGGGTAATCTTTTCAAACTGAATCGTGCTGGGGATAGTTCATTGGAATT 1056 Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315 ||| ||| |||||||||| |||||||| |||| ||||||||| ||| ||||||||||| Sbjct 1057 TTTGAACTTAAACGAGGAATTCCTAGTAAACGCGAGTCATCAGCTCGCATTGATTACGTC 1116 Query 316 CCTGCCCTTTGTA 328 ||||||||||||| Sbjct 1117 CCTGCCCTTTGTA 1129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947140932608