Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq137 116 1e-23 >seq137 Length=16762 Score = 116 bits (128), Expect = 1e-23 Identities = 178/251 (71%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| |||||||||||| | | |||| |||| || |||| | |||| Sbjct 998 GACCCGAATCCAAGTGATCTAGTTAGGAACAGGTTGAACGTTTAGTAAATTAAACGGGAG 1057 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | |||||| ||| ||||| |||| || ||||| | | |||||||||||| ||| Sbjct 1058 GACCGAACACACGTCTGTTGCAAAAGGCGGTGATGATTTCTAATTAGGGGTGAAAGTCTA 1117 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214 | ||||||||| ||||||||||| | | ||||| ||||||| |||| || | || | | Sbjct 1118 ATCAAACTTGGTAATAGCTGGTTTTTTGCGAAATCTATTTAAGTAGAGCATAAAACAATA 1177 Query 215 CCATCGGGGGTAGAGCACTGTTATGGCTAGGGGG-TCATTGCGACTTACCAAACCATTGC 273 | |||| ||||||| || || ||||| || | | | ||||||||| ||| Sbjct 1178 AAAATTCAGGTAAAGCACTGCTAAGGTGCGGGGGCTCTTAGAG-TTTACCAAACTTATGC 1236 Query 274 AAACTCCGAAT 284 |||||| |||| Sbjct 1237 AAACTCTGAAT 1247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689494636544