Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq137 116 1e-23
>seq137
Length=16762
Score = 116 bits (128), Expect = 1e-23
Identities = 178/251 (71%), Gaps = 2/251 (1%)
Strand=Plus/Plus
Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94
|||||||| |||||||||||| | | |||| |||| || |||| | ||||
Sbjct 998 GACCCGAATCCAAGTGATCTAGTTAGGAACAGGTTGAACGTTTAGTAAATTAAACGGGAG 1057
Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154
| |||||| ||| ||||| |||| || ||||| | | |||||||||||| |||
Sbjct 1058 GACCGAACACACGTCTGTTGCAAAAGGCGGTGATGATTTCTAATTAGGGGTGAAAGTCTA 1117
Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCA 214
| ||||||||| ||||||||||| | | ||||| ||||||| |||| || | || | |
Sbjct 1118 ATCAAACTTGGTAATAGCTGGTTTTTTGCGAAATCTATTTAAGTAGAGCATAAAACAATA 1177
Query 215 CCATCGGGGGTAGAGCACTGTTATGGCTAGGGGG-TCATTGCGACTTACCAAACCATTGC 273
| |||| ||||||| || || ||||| || | | | ||||||||| |||
Sbjct 1178 AAAATTCAGGTAAAGCACTGCTAAGGTGCGGGGGCTCTTAGAG-TTTACCAAACTTATGC 1236
Query 274 AAACTCCGAAT 284
|||||| ||||
Sbjct 1237 AAACTCTGAAT 1247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689494636544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |