Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq137 127 7e-27 >seq137 Length=16762 Score = 127 bits (140), Expect = 7e-27 Identities = 202/290 (70%), Gaps = 20/290 (7%) Strand=Plus/Minus Query 275 CAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCA 333 ||||| || | |||| ||||| | ||||||||||||| | ||| | ||| Sbjct 2286 CAATATAAAAATGTAGTAAAGGTTCATAGGGTCTTTTCGTCTTACCGTTTATACTCCGCA 2227 Query 334 TCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACG 393 |||| || | | |||||||| | | | || | ||||||| | |||||||||| Sbjct 2226 TCTTCACGGACATTTCAATTTCATTGAGTTTATGTTGGAGACAGTGAGAAAGTCGTTACG 2167 Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||| |||||| ||||||||||||| |||||||||| |||||||||||| || | || Sbjct 2166 CCATTCATGCAGGACGGAACTTACCCGTCAAGGAATTTTGCTACCTTAGGACCGTCAGAG 2107 Query 454 TTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCA 513 |||| ||||||||||| | |||| | || ||| | | | | Sbjct 2106 TTACAGCCGCCGTTTACGAGAGCTT-AGTT-------TCAAA-----------GCGTAAA 2066 Query 514 CGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | | ||| |||||| || ||||||||||||||||||||| ||||| || Sbjct 2065 CAATTCCACTTAACTTTTTCGCACCGGGCAGGCGTCAGTCCCTATACTTC 2016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702293838336