Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3431 129 1e-27 seq258 129 1e-27 seq5420 80.6 4e-13 >seq3431 Length=756 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| |||||| ||||||||| || || || |||| ||||||| Sbjct 85 GTACGAGAGGAACCGTTTG-TTCAGA-TAATTGGTTCATGGGGTTGCCTGAAAAGGCAGT 142 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 143 GCCCCGAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 200 >seq258 Length=12308 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| |||||| ||||||||| || || || |||| ||||||| Sbjct 12224 GTACGAGAGGAACCGTTTG-TTCAGA-TAATTGGTTCATGGGGTTGCCTGAAAAGGCAGT 12167 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 12166 GCCCCGAAGCTACCATCTGTAGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 12109 >seq5420 Length=1728 Score = 80.6 bits (88), Expect = 4e-13 Identities = 92/119 (77%), Gaps = 5/119 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCA-GAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAG 59 ||||||||||||||| | |||| | || |||| | |||| || ||| | || Sbjct 1645 GTACGAGAGGAACCGTTGG-TTCACGCAT--TTGGCAAT-GCGGTTGATTGAAACGTCAA 1590 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||||| ||| |||||| ||||||||||||||||| | ||||||| || Sbjct 1589 TGCCGCGAAGCTACCACGTGCAGGATTAAGGCTGAACGCCTCTAAGCCCGAATCCAGGC 1531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819150511104