Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
6_20[genbank_20GCA_5F900128565.1_202016-12-02] 6,236 sequences; 21,121,382 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2746 551 2e-154
seq83 551 2e-154
seq5 551 2e-154
seq1 551 2e-154
>seq2746
Length=4197
Score = 551 bits (610), Expect = 2e-154
Identities = 433/509 (85%), Gaps = 7/509 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| |||||| | | |||| | || ||||||||||||||||||
Sbjct 45 GTACTCATTCCAATTGCAAGACACTGT-GTGCCCCGCATTGATATTTATTGTCACTACCT 103
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 104 CCCCGAATTGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 163
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 164 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTCACCGCCATGGTA 223
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| ||| || ||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct 224 GTCCAATACACTACCATCGAAAGCTGATAGGGCAGAAACTTGAATGATTCATCGCCGGCA 283
Query 241 C-AAGGCC-ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298
| |||||| |||||| || ||||||||||| ||||||| | | ||||| | ||||
Sbjct 284 CAAAGGCCTCTGCGATCCGCACAGTTATTATGACTCACCAAAGGCCTCCGAAAAGGGTTG 343
Query 299 GTTTTTTATCTAATAAATACA-CCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCT 356
| || ||||||||||| || | || | |||| | | ||| | |||||||||||||
Sbjct 344 G-TTGATATCTAATAAACGCATCTCCACCAGAAGAAGAGAATTTAATGCATGTATTAGCT 402
Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416
|||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||| ||
Sbjct 403 CTAGAATTACTACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACTATAACTGATATA 462
Query 417 ATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAAT 475
||||||| |||||||||||||||||| | |||| ||||||||| ||||||||||||||||
Sbjct 463 ATGAGCCGTTCGCAGTTTCACTGTATAAAATTGTTTATACTTACACATGCATGGCTTAAT 522
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||| ||| |||||||||||||||
Sbjct 523 CTTTGAGACGAGCGTATGACTACTGGCAG 551
>seq83
Length=20893
Score = 551 bits (610), Expect = 2e-154
Identities = 433/509 (85%), Gaps = 7/509 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| |||||| | | |||| | || ||||||||||||||||||
Sbjct 45 GTACTCATTCCAATTGCAAGACACTGT-GTGCCCCGCATTGATATTTATTGTCACTACCT 103
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 104 CCCCGAATTGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 163
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 164 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTCACCGCCATGGTA 223
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| ||| || ||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct 224 GTCCAATACACTACCATCGAAAGCTGATAGGGCAGAAACTTGAATGATTCATCGCCGGCA 283
Query 241 C-AAGGCC-ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298
| |||||| |||||| || ||||||||||| ||||||| | | ||||| | ||||
Sbjct 284 CAAAGGCCTCTGCGATCCGCACAGTTATTATGACTCACCAAAGGCCTCCGAAAAGGGTTG 343
Query 299 GTTTTTTATCTAATAAATACA-CCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCT 356
| || ||||||||||| || | || | |||| | | ||| | |||||||||||||
Sbjct 344 G-TTGATATCTAATAAACGCATCTCCACCAGAAGAAGAGAATTTAATGCATGTATTAGCT 402
Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416
|||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||| ||
Sbjct 403 CTAGAATTACTACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACTATAACTGATATA 462
Query 417 ATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAAT 475
||||||| |||||||||||||||||| | |||| ||||||||| ||||||||||||||||
Sbjct 463 ATGAGCCGTTCGCAGTTTCACTGTATAAAATTGTTTATACTTACACATGCATGGCTTAAT 522
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||| ||| |||||||||||||||
Sbjct 523 CTTTGAGACGAGCGTATGACTACTGGCAG 551
>seq5
Length=33316
Score = 551 bits (610), Expect = 2e-154
Identities = 433/509 (85%), Gaps = 7/509 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| |||||| | | |||| | || ||||||||||||||||||
Sbjct 33272 GTACTCATTCCAATTGCAAGACACTGT-GTGCCCCGCATTGATATTTATTGTCACTACCT 33214
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 33213 CCCCGAATTGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 33154
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 33153 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTCACCGCCATGGTA 33094
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| ||| || ||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct 33093 GTCCAATACACTACCATCGAAAGCTGATAGGGCAGAAACTTGAATGATTCATCGCCGGCA 33034
Query 241 C-AAGGCC-ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298
| |||||| |||||| || ||||||||||| ||||||| | | ||||| | ||||
Sbjct 33033 CAAAGGCCTCTGCGATCCGCACAGTTATTATGACTCACCAAAGGCCTCCGAAAAGGGTTG 32974
Query 299 GTTTTTTATCTAATAAATACA-CCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCT 356
| || ||||||||||| || | || | |||| | | ||| | |||||||||||||
Sbjct 32973 G-TTGATATCTAATAAACGCATCTCCACCAGAAGAAGAGAATTTAATGCATGTATTAGCT 32915
Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416
|||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||| ||
Sbjct 32914 CTAGAATTACTACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACTATAACTGATATA 32855
Query 417 ATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAAT 475
||||||| |||||||||||||||||| | |||| ||||||||| ||||||||||||||||
Sbjct 32854 ATGAGCCGTTCGCAGTTTCACTGTATAAAATTGTTTATACTTACACATGCATGGCTTAAT 32795
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||| ||| |||||||||||||||
Sbjct 32794 CTTTGAGACGAGCGTATGACTACTGGCAG 32766
>seq1
Length=34634
Score = 551 bits (610), Expect = 2e-154
Identities = 433/509 (85%), Gaps = 7/509 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| |||||| | | |||| | || ||||||||||||||||||
Sbjct 45 GTACTCATTCCAATTGCAAGACACTGT-GTGCCCCGCATTGATATTTATTGTCACTACCT 103
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 104 CCCCGAATTGGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 163
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 164 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTCACCGCCATGGTA 223
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| ||| || ||||||||||||| |||||||||||||| |||||||| ||||||||||
Sbjct 224 GTCCAATACACTACCATCGAAAGCTGATAGGGCAGAAACTTGAATGATTCATCGCCGGCA 283
Query 241 C-AAGGCC-ATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTG 298
| |||||| |||||| || ||||||||||| ||||||| | | ||||| | ||||
Sbjct 284 CAAAGGCCTCTGCGATCCGCACAGTTATTATGACTCACCAAAGGCCTCCGAAAAGGGTTG 343
Query 299 GTTTTTTATCTAATAAATACA-CCCCTTCCGAAGTCGGGGTTTTTA-GCATGTATTAGCT 356
| || ||||||||||| || | || | |||| | | ||| | |||||||||||||
Sbjct 344 G-TTGATATCTAATAAACGCATCTCCACCAGAAGAAGAGAATTTAATGCATGTATTAGCT 402
Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416
|||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||| ||
Sbjct 403 CTAGAATTACTACGGTTATCCAAGTAGTAAGGTATTATCAAATAAACTATAACTGATATA 462
Query 417 ATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAAT 475
||||||| |||||||||||||||||| | |||| ||||||||| ||||||||||||||||
Sbjct 463 ATGAGCCGTTCGCAGTTTCACTGTATAAAATTGTTTATACTTACACATGCATGGCTTAAT 522
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||| ||| |||||||||||||||
Sbjct 523 CTTTGAGACGAGCGTATGACTACTGGCAG 551
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510305811456
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