Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq25219 232 1e-58 seq24965 232 1e-58 >seq25219 Length=11430 Score = 232 bits (256), Expect = 1e-58 Identities = 191/229 (83%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| || || ||||||| ||| |||||||||||| | Sbjct 6382 GTACAAAGGGCAGGGACGTAATCATTGC-AGATTGATGATCTGCGATTACTAGGAATT-C 6325 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| |||| || ||||||||| ||||||||| | ||||||| || || | | ||| Sbjct 6324 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCTAACACGATGCAAGTTAACGGGATT 6265 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||||||||||| ||| | ||||| | ||||| |||| |||||||||| Sbjct 6264 ACCCAGGCCTCTCGGCCAAGGTTATATGCCTGTTGAGTGCATCATTGTAACGCGCGTGCG 6205 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct 6204 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCCATCTTCC 6156 >seq24965 Length=558 Score = 232 bits (256), Expect = 1e-58 Identities = 191/229 (83%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| || || ||||||| ||| |||||||||||| | Sbjct 330 GTACAAAGGGCAGGGACGTAATCATTGC-AGATTGATGATCTGCGATTACTAGGAATT-C 387 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| |||| || ||||||||| ||||||||| | ||||||| || || | | ||| Sbjct 388 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCTAACACGATGCAAGTTAACGGGATT 447 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||||||||||| ||| | ||||| | ||||| |||| |||||||||| Sbjct 448 ACCCAGGCCTCTCGGCCAAGGTTATATGCCTGTTGAGTGCATCATTGTAACGCGCGTGCG 507 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||| | | ||||| Sbjct 508 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCGCCATCTTCC 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751629251780