Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq50892 109 6e-22 seq43102 109 6e-22 >seq50892 Length=141790 Score = 109 bits (120), Expect = 6e-22 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 76158 GGGTCTTTCTGTCCTGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATTTCACCGAG 76099 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| ||| || ||||||| ||||||||||||||||| Sbjct 76098 CCCCTCTCCGAGACAGTATCCAAATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGA 76039 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 76038 CAAGGAATTTCGCTACCTTAGGACCGTTA 76010 Score = 109 bits (120), Expect = 6e-22 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 135931 GGGTCTTTCTGTCCTGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATTTCACCGAG 135990 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| ||| || ||||||| ||||||||||||||||| Sbjct 135991 CCCCTCTCCGAGACAGTATCCAAATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGA 136050 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 136051 CAAGGAATTTCGCTACCTTAGGACCGTTA 136079 >seq43102 Length=56976 Score = 109 bits (120), Expect = 6e-22 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 16869 GGGTCTTTCTGTCCTGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATTTCACCGAG 16810 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | ||||||| ||| || ||||||| ||||||||||||||||| Sbjct 16809 CCCCTCTCCGAGACAGTATCCAAATCATTACGCCTTTCGTGCGGGTCGGAACTTACCCGA 16750 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 16749 CAAGGAATTTCGCTACCTTAGGACCGTTA 16721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546930221508