Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thalassiosira_20oceanica_20[genbank_20GCA_5F000296195.2_202012-07- 25] 50,892 sequences; 92,185,637 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq25219 143 3e-32 >seq25219 Length=11430 Score = 143 bits (158), Expect = 3e-32 Identities = 142/181 (78%), Gaps = 11/181 (6%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC--TCGAATACATTACCATG 70 |||||| |||||||||||||| ||| ||||||||| | ||| | ||||| |||| |||| Sbjct 5493 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCTTATGCCGTTGAATATATTAGCATG 5552 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTC---TAGGACCGCCCGTAAT 127 |||||||| ||||||| | ||| ||||||||| ||||| || || ||||| Sbjct 5553 GAATAATAAGATAGGACTT-CGGAACTATTTTGTTGGTTTGCGTTACGAA-----GTAAT 5606 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| |||||| | ||||| |||||| |||||||||||||||||| Sbjct 5607 GATTAATAGGGACAGTTGGGGGTATTCGTATTTCGTTGTCAGAGGTGAAATTCTTGGATT 5666 Query 188 T 188 | Sbjct 5667 T 5667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511747575680