Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1
_202017-05-22] 10,764 sequences; 18,099,857 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq6249 89.7 2e-12
>seq6249
Length=3497
Score = 89.7 bits (98), Expect = 2e-12
Identities = 125/173 (72%), Gaps = 2/173 (1%)
Strand=Plus/Minus
Query 364395 CCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGA-GGGAATGGAGAGA 364453
|||||||| | | |||||||||||| || | |||||| || |||||| | |
Sbjct 2952 CCTTGGAGCAAATCAGCTCCATGAGCTTGCCCACAGTCATGCGGCTCGGGAATCC-GTGG 2894
Query 364454 GGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCGGGAGGA 364513
||||| |||||||| || ||||| ||||| | | ||||||||||| || | | ||
Sbjct 2893 GGGTTCATGATGATATCGGGCACGATGCCCTGGTCCGTAAAGGGCATGTCCACCTGCGGC 2834
Query 364514 ACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCC 364566
|||||||| || | | ||||||||| | | ||| || | |||||||||||
Sbjct 2833 ACGATGAGGCCGACGACGCCCTTTTGCCCGTGGCGCGAGGAGAACTTGTCGCC 2781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884626448248252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |