Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustochytrium_20sp._20ATCC_2026185_20[genbank_20GCA_5F002154235.1 _202017-05-22] 10,764 sequences; 18,099,857 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq6249 89.7 2e-12 >seq6249 Length=3497 Score = 89.7 bits (98), Expect = 2e-12 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 364395 CCTTGGAGGCTACAATCTCCATGAGCTTACCAATAGTCATACGAGA-GGGAATGGAGAGA 364453 |||||||| | | |||||||||||| || | |||||| || |||||| | | Sbjct 2952 CCTTGGAGCAAATCAGCTCCATGAGCTTGCCCACAGTCATGCGGCTCGGGAATCC-GTGG 2894 Query 364454 GGGTTGATGATGATGTCAGGCACCATGCCGTCAGCGGTAAAGGGCATATCTTCGGGAGGA 364513 ||||| |||||||| || ||||| ||||| | | ||||||||||| || | | || Sbjct 2893 GGGTTCATGATGATATCGGGCACGATGCCCTGGTCCGTAAAGGGCATGTCCACCTGCGGC 2834 Query 364514 ACGATGAGACCAATGGTTCCCTTTTGCGCATAGCGAGAAGCAAACTTGTCGCC 364566 |||||||| || | | ||||||||| | | ||| || | ||||||||||| Sbjct 2833 ACGATGAGGCCGACGACGCCCTTTTGCCCGTGGCGCGAGGAGAACTTGTCGCC 2781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884626448248252