Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2970 118 2e-24 >seq2970 Length=3935 Score = 118 bits (130), Expect = 2e-24 Identities = 90/104 (87%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || ||| |||||||| ||| |||||||||| ||| Sbjct 3682 GTACAAAGGGCAGGGACGTAATCAATGCAAGC-TGATGACTTGCGTTTACTAGGAA-TTC 3625 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 104 |||||| |||| || ||||||||| ||||||||| | |||||| Sbjct 3624 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCTAGCACGAT 3581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751961149095