Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2905 237 7e-60 >seq2905 Length=4471 Score = 237 bits (262), Expect = 7e-60 Identities = 225/286 (79%), Gaps = 26/286 (9%) Strand=Plus/Plus Query 423 GGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-AAACCCGTGCGCGTAATGA 481 ||||||||||||||||||| | ||| ||| || |||||| |||||| ||||||||| Sbjct 408 GGACCAAGGAGTCTAACATGTGTGCAAGTATTAGGGTGTGGAAACCCAAATGCGTAATGA 467 Query 482 AAGTGAACGGA--------------GGTGGGAAC---CCGTGAGGGT----GCACCATCG 520 |||| || | ||| |||| | || | ||| |||| |||| Sbjct 468 AAGTAAATGCTACCTGTGTAGCTTTGGTAGGAAAGGGCTGTCATGGTCCTGGCACTATCG 527 Query 521 ACCGATCCTGATGTCTTCGGATG---GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAA 577 ||||||| ||| || ||| || |||||||||| ||||||| |||||| ||||||| Sbjct 528 ACCGATCATGAAC-CTACGGGTGAAAGATTTGAGTATGAGCATATATGTTGGTACCCGAA 586 Query 578 AGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAG 637 |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| || Sbjct 587 AGATGGTGAACTATGCCTGAATAGAGTGAAGCCAGGGGAAACTCTGGTGGAAGCTCGTAG 646 Query 638 CGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 647 CGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079885607150