Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2670 141 2e-31 >seq2670 Length=5650 Score = 141 bits (156), Expect = 2e-31 Identities = 146/190 (77%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 172 TGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGT 231 ||| | |||| ||| |||| |||||||||||||||||| ||||| ||||||| || | Sbjct 2389 TGCGCAAACATCTCCTATTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACGTCAT 2330 Query 232 CTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG 291 ||| ||| |||||||| ||||||||||| ||||||||||| || ||||| ||| Sbjct 2329 CTTACGATTTAGCAGAGTCCTGTGTTTTTATTAAACAGTCGCAACCCCCAATTCTGTGCC 2270 Query 292 GCCTGTCA-----TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGT 346 ||| | | | | ||| || | ||||||| ||||||| | ||||||||||||||| Sbjct 2269 ACCTCTTAAAAATTTAAAAGGTACTCTTTCTCCCGAAGTTACAGAGTCATTTTGCCGAGT 2210 Query 347 TCCTT-AACA 355 ||||| |||| Sbjct 2209 TCCTTCAACA 2200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062343342208