Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq3759 89.7 1e-15 >seq3759 Length=2982 Score = 89.7 bits (98), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 23 TTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGC 82 ||||| ||| || |||| ||||||||||||| ||||||||| |||||||| |||||| Sbjct 532 TTCACTCACTTGGTATTGT-TGGATCAGGCTTT--CCCATTGTCTAATATTCCTCACTGC 476 Query 83 TGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142 || || | ||| ||| || ||||||||| || |||| |||| ||| || ||| | Sbjct 475 TG-CTTTTAAAAAAGTTTGGGTCGAGTCTCAGTTGCAATGTGGCTGACCATTCTTTCAAA 417 Query 143 CCAGTTACGGATCGTCGCCT 162 |||||| ||||||| || Sbjct 416 TCAGTTAAATATCGTCGGCT 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071942830240