Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1625 150 3e-34 >seq1625 Length=605 Score = 150 bits (166), Expect = 3e-34 Identities = 196/270 (73%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 || ||| |||||||||| |||||| |||||| | ||| |||||| | | || ||| Sbjct 292 GGTTTCTTGCTTAGATGCTTTCAGCAATTATCCAATATAAATTTAGCTACTCGGCGCTGC 351 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 | || ||||| | | |||||| | ||| | | |||||||||||||||| Sbjct 352 TCAATATAGAACAACCGATACACCAGTGATTTACCTTTTTCGGTCCTCTCGTACTAGAAT 411 Query 128 CAGCTCCTCTCAAATTTCCTACGC--CCACGACGGATAGGGACCGAACTGTCTCGCGACG 185 ||| || ||| |||| | | | |||||| || ||||||||| ||||| Sbjct 412 CAGAGTCTTTCATTTTTCAAAAAAATCTATAGAAGATAGGATCCAAACTGTCTCACGACG 471 Query 186 TTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACT 245 |||| |||||| ||| ||| || ||||||| ||||||||||| ||||||||| |||| || Sbjct 472 TTCTAAACCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTCT 531 Query 246 TCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||| |||||||| || ||| |||||||| Sbjct 532 TCAGCTCCAGGATGTGATGAGTCGACATCG 561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780759661188