Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq2062 82.4 2e-11 >seq2062 Length=6744 Score = 82.4 bits (90), Expect = 2e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 2776 TCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAAC 2835 || |||||||| || ||||||||||| || || || ||| |||| |||| | | Sbjct 4491 TCGCACCGTTCGGGAGAAACTGAAGACTCGTTCATTGCCGATCTTGCTGTTGGTTTGAGC 4550 Query 2836 GCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAA 2895 ||||||||||| ||||| ||| | | ||| | || || |||| || ||||||||| Sbjct 4551 GCTGGTCAAATCAAGACTGGTGCTCCATGCCGTTCCGAACGCCTTGCCAAGTACAACCAA 4610 Query 2896 TTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATACCGTGGT 2943 | ||||| |||||||| || | || ||| ||| | ||| |||| Sbjct 4611 CTTCTTCGCATCGAAGAAGAATTGGGCGAAAATGCTGTGTACGCTGGT 4658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156028518185652