Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thraustotheca_20clavata_20[genbank_20GCA_5F002081575.1_202017-04-06] 5,333 sequences; 39,100,730 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2069 96.9 1e-14 >seq2069 Length=6660 Score = 96.9 bits (106), Expect = 1e-14 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| |||||||| || ||||| | | ||||||| | ||| || ||||| | ||| Sbjct 4279 CCAATTGTCATACGCGATGGAATAGCGTGAGGGTTCACGATAATATCAGGTGTGACGCCT 4220 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 || |||||| ||||||||||| || || | | |||||| || |||||||| | Sbjct 4219 TCGATGGTAAAAGGCATATCTTCTTGACGATATGTCATACCAATCGTACCCTTTTGACCG 4160 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAAT 364569 | ||||||||||||||||| ||||| Sbjct 4159 TGACGAGAAGCAAACTTGTCCCCAAT 4134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884757607479369