Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq395 163 4e-38
seq1103 147 3e-33
seq236 140 5e-31
seq1141 118 2e-24
seq2503 96.9 5e-18
seq926 84.2 3e-14
seq2541 75.2 2e-11
seq1444 73.4 6e-11
>seq395
Length=478428
Score = 163 bits (180), Expect = 4e-38
Identities = 182/235 (77%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 417855 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 417798
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||| |||| || |||| | ||
Sbjct 417797 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCAAGAGTGGGGTTCAGCGTGTT 417738
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| ||| |||| |||| | | || || ||| | || ||||||| |||||||||
Sbjct 417737 ACCCACGCCTCTCGGTGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGACGCGCGTGC 417679
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 417678 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 417625
>seq1103
Length=227817
Score = 147 bits (162), Expect = 3e-33
Identities = 168/219 (77%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || || |||| ||||| ||||| |||||||||| |||||| |
Sbjct 197133 GTACAAAGGGCAGGGACTTAATCTACGCAAGCTT-ATGACCCGCGCTTACTGGGAATT-C 197190
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | || || |||| || |||| | ||
Sbjct 197191 CTCGTTCATGGGAAATAATTGCAATCCACAATGCCTATCATGAGTGGGGTTCAGCGGGTT 197250
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| ||| ||||| |||| | | || || || | || ||||||| |||| |||||
Sbjct 197251 ACCCACGCCTCTCGGCAAAGGGTAGACACACGCCGA-TCCACTCAGTGTGGCGCTCGTGC 197309
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||||||||||
Sbjct 197310 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 197348
>seq236
Length=607901
Score = 140 bits (154), Expect = 5e-31
Identities = 172/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|| |||||||||||||| || ||||||||||||| ||||| | |||||||| |||||| |
Sbjct 162333 GTCCAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCACGCTTACTGGGAATT-C 162390
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | || ||||||||| ||||| ||||||| |||| | ||
Sbjct 162391 CTCGTTCGTGGGAAATAATTGCAATCCCAAATCCCTATCACGAGTGGGGTTCAGCGGGTT 162450
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| ||| ||| | |||| | | || || ||| | || ||||||| |||| ||||
Sbjct 162451 ACCCACGCCTCTCGACGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGACGCGTGTGC 162509
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||| | ||||||||||||||||||||||||| |||| ||||| ||
Sbjct 162510 AGCCCCGGACATCTAAGGGCATCACAGACCTGTCATTG-CTCAATCT 162555
>seq1141
Length=230261
Score = 118 bits (130), Expect = 2e-24
Identities = 150/200 (75%), Gaps = 5/200 (3%)
Strand=Plus/Minus
Query 36 ATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95
||||| |||||||||| |||||| ||||||| | | || ||||||||| | |||||
Sbjct 52691 ATGACCCGCGCTTACTGGGAATT-CCTCGTTCATGGGAAATAATTGCAATCCCCAATCCC 52633
Query 96 CATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG 154
|||| || |||| | |||||| ||| |||| |||| | | || || ||
Sbjct 52632 TATCAAGAGTGGGGTTCAGCGTGTTACCCACGCCTCTCGGTGAAGGGTAGACACACGCTG 52573
Query 155 AATACA-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213
| | || ||||||| ||||||||| |||| | |||||||||||||||||||||||||||
Sbjct 52572 A-TCCACTCAGTGTGACGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 52514
Query 214 TTGCCTCAAACTTCCGTGGC 233
||| ||||| || |||||
Sbjct 52513 TTG-CTCAATCTCGTGTGGC 52495
>seq2503
Length=76087
Score = 96.9 bits (106), Expect = 5e-18
Identities = 159/219 (73%), Gaps = 9/219 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||| | || ||||| | ||||| || ||||||||||||| |||||| |
Sbjct 45038 GTACAAAGGGCAGGTAT-TAATCAACACAAGCTT-ATAACTCGCGCTTACTGGGAATT-C 45094
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCAA-AGAT 118
||| || | | || ||||||| | | | |||| || |||| |||| || |
Sbjct 45095 CTCATTCATGGA-AATAATTGCA-TACCCCAGCCCCTATTACGAGTGGGGTTCAGCAGGT 45152
Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
||||| ||| | || ||| | | || | ||| ||||||| |||| ||||
Sbjct 45153 TACCCATGCCTCTTGGTGAAGAGTACACACAAG--GAACCACTCAGTGTGGCGCATGTGC 45210
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||||||||||
Sbjct 45211 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 45249
>seq926
Length=264063
Score = 84.2 bits (92), Expect = 3e-14
Identities = 71/85 (84%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || |||||| |||||| ||||| |||||||||| |||| |||
Sbjct 260767 GTACAAAGGGCAGGGACTTAATCAACGTGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 260824
Query 61 CTCGTTGAAGACCAACAATTGCAAT 85
||| || | | || |||||||||
Sbjct 260825 CTCATTTATGGGAAATAATTGCAAT 260849
>seq2541
Length=74327
Score = 75.2 bits (82), Expect = 2e-11
Identities = 52/58 (90%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58
||||||||||||||| | || ||||||||||||| ||||| |||||||||| ||||||
Sbjct 53166 GTACAAAGGGCAGGGGCTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT 53222
>seq1444
Length=172893
Score = 73.4 bits (80), Expect = 6e-11
Identities = 77/99 (78%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||| || |||| || ||||| ||||| ||| |||||| |||| |||
Sbjct 117640 GTACAAAGGGCAGGGATTTAATCAATGCAAGCTT-ATGACCCGCACTTACTGGGAA-TTC 117697
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 99
|| ||| | | || ||||||||| | ||||| |||
Sbjct 117698 CTGGTTCATGGGAAATAATTGCAATCCCCAATCCCTATC 117736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751778434010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |