Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq395 163 4e-38 seq1103 147 3e-33 seq236 140 5e-31 seq1141 118 2e-24 seq2503 96.9 5e-18 seq926 84.2 3e-14 seq2541 75.2 2e-11 seq1444 73.4 6e-11 >seq395 Length=478428 Score = 163 bits (180), Expect = 4e-38 Identities = 182/235 (77%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 417855 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 417798 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| |||| || |||| | || Sbjct 417797 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCAAGAGTGGGGTTCAGCGTGTT 417738 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| |||| |||| | | || || ||| | || ||||||| ||||||||| Sbjct 417737 ACCCACGCCTCTCGGTGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGACGCGCGTGC 417679 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 417678 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 417625 >seq1103 Length=227817 Score = 147 bits (162), Expect = 3e-33 Identities = 168/219 (77%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || || |||| ||||| ||||| |||||||||| |||||| | Sbjct 197133 GTACAAAGGGCAGGGACTTAATCTACGCAAGCTT-ATGACCCGCGCTTACTGGGAATT-C 197190 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | || || |||| || |||| | || Sbjct 197191 CTCGTTCATGGGAAATAATTGCAATCCACAATGCCTATCATGAGTGGGGTTCAGCGGGTT 197250 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| ||||| |||| | | || || || | || ||||||| |||| ||||| Sbjct 197251 ACCCACGCCTCTCGGCAAAGGGTAGACACACGCCGA-TCCACTCAGTGTGGCGCTCGTGC 197309 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 197310 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 197348 >seq236 Length=607901 Score = 140 bits (154), Expect = 5e-31 Identities = 172/227 (76%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || ||||||||||||| ||||| | |||||||| |||||| | Sbjct 162333 GTCCAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCACGCTTACTGGGAATT-C 162390 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | || ||||||||| ||||| ||||||| |||| | || Sbjct 162391 CTCGTTCGTGGGAAATAATTGCAATCCCAAATCCCTATCACGAGTGGGGTTCAGCGGGTT 162450 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| ||| | |||| | | || || ||| | || ||||||| |||| |||| Sbjct 162451 ACCCACGCCTCTCGACGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGACGCGTGTGC 162509 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | ||||||||||||||||||||||||| |||| ||||| || Sbjct 162510 AGCCCCGGACATCTAAGGGCATCACAGACCTGTCATTG-CTCAATCT 162555 >seq1141 Length=230261 Score = 118 bits (130), Expect = 2e-24 Identities = 150/200 (75%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 36 ATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95 ||||| |||||||||| |||||| ||||||| | | || ||||||||| | ||||| Sbjct 52691 ATGACCCGCGCTTACTGGGAATT-CCTCGTTCATGGGAAATAATTGCAATCCCCAATCCC 52633 Query 96 CATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG 154 |||| || |||| | |||||| ||| |||| |||| | | || || || Sbjct 52632 TATCAAGAGTGGGGTTCAGCGTGTTACCCACGCCTCTCGGTGAAGGGTAGACACACGCTG 52573 Query 155 AATACA-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213 | | || ||||||| ||||||||| |||| | ||||||||||||||||||||||||||| Sbjct 52572 A-TCCACTCAGTGTGACGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 52514 Query 214 TTGCCTCAAACTTCCGTGGC 233 ||| ||||| || ||||| Sbjct 52513 TTG-CTCAATCTCGTGTGGC 52495 >seq2503 Length=76087 Score = 96.9 bits (106), Expect = 5e-18 Identities = 159/219 (73%), Gaps = 9/219 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| | || ||||| | ||||| || ||||||||||||| |||||| | Sbjct 45038 GTACAAAGGGCAGGTAT-TAATCAACACAAGCTT-ATAACTCGCGCTTACTGGGAATT-C 45094 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCC-ATCACGATGAAATTTCAA-AGAT 118 ||| || | | || ||||||| | | | |||| || |||| |||| || | Sbjct 45095 CTCATTCATGGA-AATAATTGCA-TACCCCAGCCCCTATTACGAGTGGGGTTCAGCAGGT 45152 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||| | || ||| | | || | ||| ||||||| |||| |||| Sbjct 45153 TACCCATGCCTCTTGGTGAAGAGTACACACAAG--GAACCACTCAGTGTGGCGCATGTGC 45210 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 45211 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 45249 >seq926 Length=264063 Score = 84.2 bits (92), Expect = 3e-14 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||| |||||| ||||| |||||||||| |||| ||| Sbjct 260767 GTACAAAGGGCAGGGACTTAATCAACGTGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 260824 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 ||| || | | || ||||||||| Sbjct 260825 CTCATTTATGGGAAATAATTGCAAT 260849 >seq2541 Length=74327 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATT 58 ||||||||||||||| | || ||||||||||||| ||||| |||||||||| |||||| Sbjct 53166 GTACAAAGGGCAGGGGCTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT 53222 >seq1444 Length=172893 Score = 73.4 bits (80), Expect = 6e-11 Identities = 77/99 (78%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| || |||| || ||||| ||||| ||| |||||| |||| ||| Sbjct 117640 GTACAAAGGGCAGGGATTTAATCAATGCAAGCTT-ATGACCCGCACTTACTGGGAA-TTC 117697 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATC 99 || ||| | | || ||||||||| | ||||| ||| Sbjct 117698 CTGGTTCATGGGAAATAATTGCAATCCCCAATCCCTATC 117736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751778434010