Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2533 86.0 3e-15 SEQ17653 71.6 8e-11 SEQ16505 71.6 8e-11 >seq2533 Length=89611 Score = 86.0 bits (94), Expect = 3e-15 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| ||| | | | |||| | | |||| ||||| |||| Sbjct 12263 GAACCCAAAGACTTTGGCTTCCCAGACGCTGCCCGGTGGGTCATGGGAATAACGCCGCCG 12322 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||| ||| ||||| ||||||||||||||||||||| Sbjct 12323 GATCGCTAGTTGGCATCGTTTATGGTCGGAACTACAACGGTATCTGATCGTCTTCGA 12379 >SEQ17653 Length=1869 Score = 71.6 bits (78), Expect = 8e-11 Identities = 84/114 (74%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || || ||| |||||| |||| | || | |||| |||||||| | ||||| || Sbjct 1454 GAGCCAAAACACTTTGGTTTCCCTTACGCTGCCTGGCGAGTCATGAGAATAACGCTGCAG 1513 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||| | ||| ||||| ||||| |||| || | ||| ||||||||||||||| Sbjct 1514 GATCACCAGTTGGCATCGTTTATGGTTGGAACAATGACAGTATCTGATCGTCTT 1567 >SEQ16505 Length=2455 Score = 71.6 bits (78), Expect = 8e-11 Identities = 84/114 (74%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || || ||| |||||| |||| | || | |||| |||||||| | ||||| || Sbjct 126 GAGCCAAAACACTTTGGTTTCCCTTACGCTGCCTGGCGAGTCATGAGAATAACGCTGCAG 67 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 |||| | ||| ||||| ||||| |||| || | ||| ||||||||||||||| Sbjct 66 GATCACCAGTTGGCATCGTTTATGGTTGGAACAATGACAGTATCTGATCGTCTT 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278320619460