Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq2533 86.0 3e-15
SEQ17653 71.6 8e-11
SEQ16505 71.6 8e-11
>seq2533
Length=89611
Score = 86.0 bits (94), Expect = 3e-15
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| ||| | | | |||| | | |||| ||||| ||||
Sbjct 12263 GAACCCAAAGACTTTGGCTTCCCAGACGCTGCCCGGTGGGTCATGGGAATAACGCCGCCG 12322
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||| ||||| ||||| ||| ||||| |||||||||||||||||||||
Sbjct 12323 GATCGCTAGTTGGCATCGTTTATGGTCGGAACTACAACGGTATCTGATCGTCTTCGA 12379
>SEQ17653
Length=1869
Score = 71.6 bits (78), Expect = 8e-11
Identities = 84/114 (74%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| || ||| |||||| |||| | || | |||| |||||||| | ||||| ||
Sbjct 1454 GAGCCAAAACACTTTGGTTTCCCTTACGCTGCCTGGCGAGTCATGAGAATAACGCTGCAG 1513
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||| | ||| ||||| ||||| |||| || | ||| |||||||||||||||
Sbjct 1514 GATCACCAGTTGGCATCGTTTATGGTTGGAACAATGACAGTATCTGATCGTCTT 1567
>SEQ16505
Length=2455
Score = 71.6 bits (78), Expect = 8e-11
Identities = 84/114 (74%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| || ||| |||||| |||| | || | |||| |||||||| | ||||| ||
Sbjct 126 GAGCCAAAACACTTTGGTTTCCCTTACGCTGCCTGGCGAGTCATGAGAATAACGCTGCAG 67
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114
|||| | ||| ||||| ||||| |||| || | ||| |||||||||||||||
Sbjct 66 GATCACCAGTTGGCATCGTTTATGGTTGGAACAATGACAGTATCTGATCGTCTT 13
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278320619460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |