Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq1951 129 1e-27
seq1103 116 7e-24
seq358 111 3e-22
seq430 105 1e-20
seq1541 104 4e-20
seq2503 98.7 2e-18
seq2494 91.5 3e-16
seq419 87.8 3e-15
seq112 75.2 2e-11
seq1816 73.4 7e-11
>seq1951
Length=113854
Score = 129 bits (142), Expect = 1e-27
Identities = 171/232 (74%), Gaps = 9/232 (4%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAA-TTAGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCAT 130
||||||||||||||| ||| |||| |||||||||||| | || ||||||| |||
Sbjct 7848 TTTACTTTGAAAAAAATTAAAGTGCTCAAAGCAGGCCCAGTCGCCCGAATACCGCAGCTA 7789
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT----CTAGGACC-GCCGTA 185
|||||||| ||||||||| | |||||||||||||| ||||| || || | ||
Sbjct 7788 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTTCTCTGAATTGGGGTC 7730
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||| ||||| | |||||| | ||||| | ||||||||||||||||||
Sbjct 7729 ATGATTAAAAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 7670
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297
| ||| || | |||||||| || ||||| |||||||||||||
Sbjct 7669 CCGGCGCAGGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAA 7618
>seq1103
Length=227817
Score = 116 bits (128), Expect = 7e-24
Identities = 197/283 (70%), Gaps = 27/283 (10%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAA-TTAGAGTG 96
|||| ||| ||| |||| ||| || | | | | | ||||||||||||||| ||||||||
Sbjct 198044 ATGCTCTTAGCTGAGTGTCCCGTGGGGTCCGAAGCGTTTACTTTGAAAAAAATTAGAGTG 197985
Query 97 TTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
||||||||||||| | || ||||| ||| |||||||| ||||||||| | | |
Sbjct 197984 TTCAAAGCAGGCCCGGTCGCCTGAATATCGCAGCTAGGAATAATGGAATAGGAC-TCCAG 197926
Query 155 TTCTATTTTGTTGG-TTTCT----AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209
||||||||||| || ||||| | || | | |||||||| ||||| | ||||||
Sbjct 197925 TTCTATTTTGTGGGTTTTCTCCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGG 197866
Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGA 269
| ||||| | |||| ||||||||||||| | |||
Sbjct 197865 CATTCGTATTGTGCCGCTAGAGATGAAATTCTTGGA-----------------CCGGCGC 197823
Query 270 AAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|||| || ||||| ||||||| |||||||| |||||||||
Sbjct 197822 AAGCATTTGCCAAGAATGTTTTTGTTAATCAGAAAACGAAAGT 197780
>seq358
Length=502484
Score = 111 bits (122), Expect = 3e-22
Identities = 135/179 (75%), Gaps = 9/179 (5%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || | | | | | ||||||||||||||||||||||||
Sbjct 182475 ATGCTCTTAGCTGAGTGTCCCGTGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 182416
Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155
|||||||||||| | || |||||| ||| |||||||| ||||||||| | ||||
Sbjct 182415 TCAAAGCAGGCCCGGTCGCCTGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 182357
Query 156 TCTATTTTGTTGG-TTTCT----AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209
||||||||| || ||||| | || | | |||||||| ||||| | ||||||
Sbjct 182356 CCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGG 182298
>seq430
Length=456201
Score = 105 bits (116), Expect = 1e-20
Identities = 175/245 (71%), Gaps = 12/245 (5%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
||||||||||||||| |||||||||||||||||||| | | |||||| ||| |
Sbjct 25145 TTTACTTTGAAAAAAATAGAGTGTTCAAAGCAGGCCCAGTCACATGAATACCGCAGCTAG 25086
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT---AGGACCGCCGTAAT 187
||||||| ||||||| | | | ||||| || ||| || ||||| || || ||| ||
Sbjct 25085 GAATAATGGAATAGGGC-TCCAGTTCT-TTATGTGGGTTTTCTCTCAGAACTGCC---AT 25031
Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||| || || || | || | ||||| || | |||||||||| ||||| |
Sbjct 25030 GATTAAGAGAGACAGCCAAAGGCATTCGTATTATGGCGTTAAAGGTGAAATTTTTGGACT 24971
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
| | || | | |||||| || |||||| |||||||||||||||| ||||
Sbjct 24970 GGTGTACGATAGATGAAGGCGAAAATATTGACCAAGAATGTTTTCATTAATCA-AGAACA 24912
Query 308 AAAGT 312
|||||
Sbjct 24911 AAAGT 24907
>seq1541
Length=351212
Score = 104 bits (114), Expect = 4e-20
Identities = 111/144 (77%), Gaps = 12/144 (8%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAG-CCAGGACTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || | ||| | ||||||||||||||||||||||||
Sbjct 222804 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCAAAGCGTTTACTTTGAAAAAATTAGAGTGT 222863
Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGC--------ATGGAATAATAGAATAGGA 147
|||||||||||| | || |||||| ||| |||||||||| ||||||||
Sbjct 222864 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAATGGAATAGGA 222923
Query 148 CGTGCGGTTCTATTTTGTTGGTTT 171
| | |||||||||||||| |||||
Sbjct 222924 C-TCCGGTTCTATTTTGTGGGTTT 222946
>seq2503
Length=76087
Score = 98.7 bits (108), Expect = 2e-18
Identities = 173/246 (70%), Gaps = 11/246 (4%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATG 131
|||||||||||||| || |||||||| |||||| | | |||||| ||| |
Sbjct 46376 TTTACTTTGAAAAATTTT---TGTTCAAAACAGGCCCGGTCACCTGAATACCGCAGCTAG 46320
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT---CTAGGACC-GCCGTAAT 187
||||||| ||| ||||| | | |||||||||||| ||||| || || | | ||
Sbjct 46319 GAATAATGGAACAGGAC-TCCAGTTCTATTTTGTGGGTTTTCTCTCTGAATTGGGGCCAT 46261
Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
||||| ||||| || ||||| | | ||| | | | |||||||||||||| |
Sbjct 46260 AATTAAGAGGGACAGATGGGGGCATTTGCATTGTTCCGCTAAATGTGAAATTCTTGGACT 46201
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|| | ||| || | |||||| || ||||| |||||||||||||||| |||||
Sbjct 46200 GATACACGACGGACGAAGGCGAAATTATTTGCCAAGAATGTTTTCATTAATCA-AGAACG 46142
Query 308 AAAGTT 313
||||||
Sbjct 46141 AAAGTT 46136
>seq2494
Length=76471
Score = 91.5 bits (100), Expect = 3e-16
Identities = 78/94 (83%), Gaps = 3/94 (3%)
Strand=Plus/Plus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
|||||||||| ||||||||||||||||||||||||| | || |||||| ||| |
Sbjct 23765 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCCAGTCGCCTGAATACTGCAGCTGG 23824
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165
||||||| ||||||||| | | ||||||||||||
Sbjct 23825 GAATAATGGAATAGGAC-TCCAGTTCTATTTTGT 23857
>seq419
Length=461954
Score = 87.8 bits (96), Expect = 3e-15
Identities = 77/94 (82%), Gaps = 3/94 (3%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
|||| |||||||||||||| |||||||||||||||| | || |||||| || |
Sbjct 332133 TTTAGTTTGAAAAAATTAGGGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGTCAG 332074
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165
||||||| ||||||||| | ||||||||||||||
Sbjct 332073 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGT 332041
>seq112
Length=840645
Score = 75.2 bits (82), Expect = 2e-11
Identities = 75/94 (80%), Gaps = 4/94 (4%)
Strand=Plus/Minus
Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131
||||||||||||||| | ||||||||||||||||| |||| |||||| | |
Sbjct 633579 TTTACTTTGAAAAAAATT-AGTGTTCAAAGCAGGCCCAGTTGCCTGAATACTGCCTCTAG 633521
Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165
||||||| ||||||||| | |||||||||||||
Sbjct 633520 GAATAATGGAATAGGAC-TCTGGTTCTATTTTGT 633488
>seq1816
Length=127605
Score = 73.4 bits (80), Expect = 7e-11
Identities = 93/127 (73%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245
|||||||| ||||| | |||||| | | ||| | ||||||||||||||||||
Sbjct 36584 ATGATTAAGAGGGACGGCCGGGGGCATTCGCATTGTGCCGCTAGAGGTGAAATTCTTGGA 36525
Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305
||||| || | |||||||| || ||||| |||||||||||||||| |||
Sbjct 36524 CCGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 36466
Query 306 CGAAAGT 312
|||||||
Sbjct 36465 CGAAAGT 36459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914921651072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |