Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1951 129 1e-27 seq1103 116 7e-24 seq358 111 3e-22 seq430 105 1e-20 seq1541 104 4e-20 seq2503 98.7 2e-18 seq2494 91.5 3e-16 seq419 87.8 3e-15 seq112 75.2 2e-11 seq1816 73.4 7e-11 >seq1951 Length=113854 Score = 129 bits (142), Expect = 1e-27 Identities = 171/232 (74%), Gaps = 9/232 (4%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAA-TTAGAGTGTTCAAAGCAGGCCT--TTGCTCGAATACATTAGCAT 130 ||||||||||||||| ||| |||| |||||||||||| | || ||||||| ||| Sbjct 7848 TTTACTTTGAAAAAAATTAAAGTGCTCAAAGCAGGCCCAGTCGCCCGAATACCGCAGCTA 7789 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT----CTAGGACC-GCCGTA 185 |||||||| ||||||||| | |||||||||||||| ||||| || || | || Sbjct 7788 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTTCTCTGAATTGGGGTC 7730 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| | |||||| | ||||| | |||||||||||||||||| Sbjct 7729 ATGATTAAAAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 7670 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAA 297 | ||| || | |||||||| || ||||| ||||||||||||| Sbjct 7669 CCGGCGCAGGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAA 7618 >seq1103 Length=227817 Score = 116 bits (128), Expect = 7e-24 Identities = 197/283 (70%), Gaps = 27/283 (10%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAA-TTAGAGTG 96 |||| ||| ||| |||| ||| || | | | | | ||||||||||||||| |||||||| Sbjct 198044 ATGCTCTTAGCTGAGTGTCCCGTGGGGTCCGAAGCGTTTACTTTGAAAAAAATTAGAGTG 197985 Query 97 TTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||||||| | || ||||| ||| |||||||| ||||||||| | | | Sbjct 197984 TTCAAAGCAGGCCCGGTCGCCTGAATATCGCAGCTAGGAATAATGGAATAGGAC-TCCAG 197926 Query 155 TTCTATTTTGTTGG-TTTCT----AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 ||||||||||| || ||||| | || | | |||||||| ||||| | |||||| Sbjct 197925 TTCTATTTTGTGGGTTTTCTCCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGG 197866 Query 210 TGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGA 269 | ||||| | |||| ||||||||||||| | ||| Sbjct 197865 CATTCGTATTGTGCCGCTAGAGATGAAATTCTTGGA-----------------CCGGCGC 197823 Query 270 AAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||| || ||||| ||||||| |||||||| ||||||||| Sbjct 197822 AAGCATTTGCCAAGAATGTTTTTGTTAATCAGAAAACGAAAGT 197780 >seq358 Length=502484 Score = 111 bits (122), Expect = 3e-22 Identities = 135/179 (75%), Gaps = 9/179 (5%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || | | | | | |||||||||||||||||||||||| Sbjct 182475 ATGCTCTTAGCTGAGTGTCCCGTGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 182416 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 182415 TCAAAGCAGGCCCGGTCGCCTGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 182357 Query 156 TCTATTTTGTTGG-TTTCT----AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 ||||||||| || ||||| | || | | |||||||| ||||| | |||||| Sbjct 182356 CCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGG 182298 >seq430 Length=456201 Score = 105 bits (116), Expect = 1e-20 Identities = 175/245 (71%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 ||||||||||||||| |||||||||||||||||||| | | |||||| ||| | Sbjct 25145 TTTACTTTGAAAAAAATAGAGTGTTCAAAGCAGGCCCAGTCACATGAATACCGCAGCTAG 25086 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT---AGGACCGCCGTAAT 187 ||||||| ||||||| | | | ||||| || ||| || ||||| || || ||| || Sbjct 25085 GAATAATGGAATAGGGC-TCCAGTTCT-TTATGTGGGTTTTCTCTCAGAACTGCC---AT 25031 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| || || || | || | ||||| || | |||||||||| ||||| | Sbjct 25030 GATTAAGAGAGACAGCCAAAGGCATTCGTATTATGGCGTTAAAGGTGAAATTTTTGGACT 24971 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 | | || | | |||||| || |||||| |||||||||||||||| |||| Sbjct 24970 GGTGTACGATAGATGAAGGCGAAAATATTGACCAAGAATGTTTTCATTAATCA-AGAACA 24912 Query 308 AAAGT 312 ||||| Sbjct 24911 AAAGT 24907 >seq1541 Length=351212 Score = 104 bits (114), Expect = 4e-20 Identities = 111/144 (77%), Gaps = 12/144 (8%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAG-CCAGGACTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || | ||| | |||||||||||||||||||||||| Sbjct 222804 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCAAAGCGTTTACTTTGAAAAAATTAGAGTGT 222863 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGC--------ATGGAATAATAGAATAGGA 147 |||||||||||| | || |||||| ||| |||||||||| |||||||| Sbjct 222864 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAATGGAATAGGA 222923 Query 148 CGTGCGGTTCTATTTTGTTGGTTT 171 | | |||||||||||||| ||||| Sbjct 222924 C-TCCGGTTCTATTTTGTGGGTTT 222946 >seq2503 Length=76087 Score = 98.7 bits (108), Expect = 2e-18 Identities = 173/246 (70%), Gaps = 11/246 (4%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGCATG 131 |||||||||||||| || |||||||| |||||| | | |||||| ||| | Sbjct 46376 TTTACTTTGAAAAATTTT---TGTTCAAAACAGGCCCGGTCACCTGAATACCGCAGCTAG 46320 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT---CTAGGACC-GCCGTAAT 187 ||||||| ||| ||||| | | |||||||||||| ||||| || || | | || Sbjct 46319 GAATAATGGAACAGGAC-TCCAGTTCTATTTTGTGGGTTTTCTCTCTGAATTGGGGCCAT 46261 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 ||||| ||||| || ||||| | | ||| | | | |||||||||||||| | Sbjct 46260 AATTAAGAGGGACAGATGGGGGCATTTGCATTGTTCCGCTAAATGTGAAATTCTTGGACT 46201 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 || | ||| || | |||||| || ||||| |||||||||||||||| ||||| Sbjct 46200 GATACACGACGGACGAAGGCGAAATTATTTGCCAAGAATGTTTTCATTAATCA-AGAACG 46142 Query 308 AAAGTT 313 |||||| Sbjct 46141 AAAGTT 46136 >seq2494 Length=76471 Score = 91.5 bits (100), Expect = 3e-16 Identities = 78/94 (83%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 |||||||||| ||||||||||||||||||||||||| | || |||||| ||| | Sbjct 23765 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCCAGTCGCCTGAATACTGCAGCTGG 23824 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165 ||||||| ||||||||| | | |||||||||||| Sbjct 23825 GAATAATGGAATAGGAC-TCCAGTTCTATTTTGT 23857 >seq419 Length=461954 Score = 87.8 bits (96), Expect = 3e-15 Identities = 77/94 (82%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 |||| |||||||||||||| |||||||||||||||| | || |||||| || | Sbjct 332133 TTTAGTTTGAAAAAATTAGGGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGTCAG 332074 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165 ||||||| ||||||||| | |||||||||||||| Sbjct 332073 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGT 332041 >seq112 Length=840645 Score = 75.2 bits (82), Expect = 2e-11 Identities = 75/94 (80%), Gaps = 4/94 (4%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 ||||||||||||||| | ||||||||||||||||| |||| |||||| | | Sbjct 633579 TTTACTTTGAAAAAAATT-AGTGTTCAAAGCAGGCCCAGTTGCCTGAATACTGCCTCTAG 633521 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 165 ||||||| ||||||||| | ||||||||||||| Sbjct 633520 GAATAATGGAATAGGAC-TCTGGTTCTATTTTGT 633488 >seq1816 Length=127605 Score = 73.4 bits (80), Expect = 7e-11 Identities = 93/127 (73%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| | |||||| | | ||| | |||||||||||||||||| Sbjct 36584 ATGATTAAGAGGGACGGCCGGGGGCATTCGCATTGTGCCGCTAGAGGTGAAATTCTTGGA 36525 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| || | |||||||| || ||||| |||||||||||||||| ||| Sbjct 36524 CCGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 36466 Query 306 CGAAAGT 312 ||||||| Sbjct 36465 CGAAAGT 36459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914921651072