Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1141 230 4e-58
seq1103 228 1e-57
seq2503 201 2e-49
seq395 82.4 1e-13
seq45 77.0 5e-12
seq236 73.4 6e-11
>seq1141
Length=230261
Score = 230 bits (254), Expect = 4e-58
Identities = 202/248 (81%), Gaps = 9/248 (4%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||| ||
Sbjct 52566 TCAGTGTGACGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TC 52508
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135
|| || | |||||| | |||| | |||||||||||||| | | || ||| | ||
Sbjct 52507 AATCT-CGTGTGGCTGAACGCCATTTGTCCCTCTAAGAAGTTGGACGCCGACCGCA--CG 52451
Query 136 ATGGGGC-----TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
| | || || |||||| | ||||| |||||||| |||||||||||||||||
Sbjct 52450 AGGCCGCGTAACTAGTTAGCATGCCGGAGTCTCTTTCGTTATTGGAATTAACCAGACAAA 52391
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
|| ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||
Sbjct 52390 TCGCTCCACCAACTAAGACCGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATC 52331
Query 251 AATCTGTC 258
||||||||
Sbjct 52330 AATCTGTC 52323
>seq1103
Length=227817
Score = 228 bits (252), Expect = 1e-57
Identities = 200/246 (81%), Gaps = 5/246 (2%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| |||| ||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 197292 TCAGTGTGGCGCTCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGCTT- 197350
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATA-GTC 134
|| || |||||| | ||| | |||||||||||| | || | || ||| | |
Sbjct 197351 -AATCTCGTGTGGCTGAACACCACTTGTCCCTCTAAGACGTTAGACGCCTACCGCACGGG 197409
Query 135 GATGGGG--CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192
| || | ||| |||||| || | |||| |||| |||||| ||||||||||||||||
Sbjct 197410 GCTGCGTAACTAGTTAGCATGTCAGAGTCTAGTTCATTATCGTAATTAACCAGACAAATT 197469
Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 197470 GCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCGAGAAAGAGCTATCAA 197529
Query 253 TCTGTC 258
||||||
Sbjct 197530 TCTGTC 197535
>seq2503
Length=76087
Score = 201 bits (222), Expect = 2e-49
Identities = 198/252 (79%), Gaps = 18/252 (7%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| |||| |||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 45193 TCAGTGTGGCGCATGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-TG 45251
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135
|| || | | ||| | ||| | || ||||||||||| | | || |
Sbjct 45252 AATCT-CGTGTAACTGAACACCACTTGTGCCTCTAAGAAGTTGGACGTTGAC-----TGC 45305
Query 136 ATGGGGC-------TATTTAGCAGG--TTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
||||||| || |||||| | | || |||||||||||||||||||||||||||
Sbjct 45306 ATGGGGCCCGTAACTAGTTAGCATGCCTGAA--TCTCGTTCGTTATCGGAATTAACCAGA 45363
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246
|||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||
Sbjct 45364 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAGTCGAGAAAGAGC 45423
Query 247 TATCAATCTGTC 258
||||||||||||
Sbjct 45424 TATCAATCTGTC 45435
>seq395
Length=478428
Score = 82.4 bits (90), Expect = 1e-13
Identities = 58/65 (89%), Gaps = 1/65 (2%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| ||||||||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 417696 TCAGTGTGACGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 417638
Query 76 AAACT 80
|| ||
Sbjct 417637 AATCT 417633
>seq45
Length=1157129
Score = 77.0 bits (84), Expect = 5e-12
Identities = 66/82 (80%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236
||| ||||| ||||| |||||||||||||| | || ||| ||| ||||| ||| ||||||
Sbjct 817932 ATTCACCAGGCAAATTACTCCACCAACTAAAAGCGACCACGCAACACCAACCACAGAATC 817991
Query 237 AAGAAAGAGCTATCAATCTGTC 258
| ||| | | ||||| |||||
Sbjct 817992 AGGAATAAACCATCAACCTGTC 818013
>seq236
Length=607901
Score = 73.4 bits (80), Expect = 6e-11
Identities = 56/65 (86%), Gaps = 1/65 (2%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||| |||| |||| |||| | ||||||||||||||||||||||||| |||| |||
Sbjct 162492 TCAGTGTGACGCGTGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTCATTG-CTC 162550
Query 76 AAACT 80
|| ||
Sbjct 162551 AATCT 162555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796565234334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |