Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1103 82.4 5e-14 seq395 77.0 2e-12 >seq1103 Length=227817 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || || |||||| ||||| ||||| ||||||||||||||||||| Sbjct 197093 CTCACTAAACCATT-CAATCAGTAGTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACT 197150 Query 109 TAATACAACGCAAGCT 124 |||| | ||||||||| Sbjct 197151 TAAT-CTACGCAAGCT 197165 >seq395 Length=478428 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || |||||| | ||||||||| ||||||||||||||||||| Sbjct 417895 CTCACTAAACCATC-CAATCTGTAGTA-GAGACGGGCGGTGTGTACAAAGGGCAGGGACT 417838 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 417837 TAAT-CAACGCGAGCT 417823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300714232520