Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq358 89.7 6e-16 seq2494 82.4 9e-14 seq1951 78.8 1e-12 seq1103 77.0 4e-12 seq1541 75.2 1e-11 >seq358 Length=502484 Score = 89.7 bits (98), Expect = 6e-16 Identities = 81/100 (81%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| |||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 182341 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATTCAGGCG 182399 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||||||||||||||||||||||| |||| ||||| Sbjct 182400 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 182439 >seq2494 Length=76471 Score = 82.4 bits (90), Expect = 9e-14 Identities = 65/77 (84%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG--TAAGCCTGCTTTGAACACTCT 90 ||||||||| |||||||| ||| |||||| |||| | |||||||||||||||||| Sbjct 23841 GTCCTATTCCATTATTCCCAGCTGCAGTATTCAGGCGACTGGGCCTGCTTTGAACACTCT 23782 Query 91 AATTTTCTCAAGGTAAA 107 ||||||||||| ||||| Sbjct 23781 AATTTTCTCAAAGTAAA 23765 >seq1951 Length=113854 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| ||||||||||| Sbjct 7749 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCGGGCG 7807 Query 70 --TAAGCCTGCTTTGAACACTCTAA-TTTTCTCAAGGTAAA 107 | ||||||||||| |||| ||| |||| |||| ||||| Sbjct 7808 ACTGGGCCTGCTTTGAGCACTTTAATTTTTTTCAAAGTAAA 7848 >seq1103 Length=227817 Score = 77.0 bits (84), Expect = 4e-12 Identities = 142/197 (72%), Gaps = 10/197 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| | | ||||||||| |||||||| ||| ||||| |||| Sbjct 197909 AAACCCACAAAATAGAACTGGA-GTCCTATTCCATTATTCCTAGCTGCGATATTCAGGCG 197967 Query 70 TAAG--CCTGCTTTGAACACTCTAA-TTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 | ||||||||||||||||||| |||| |||| ||||| | | | | || | | | Sbjct 197968 ACCGGGCCTGCTTTGAACACTCTAATTTTTTTCAAAGTAAACGCTTCGGACCCCACGGGA 198027 Query 126 CAC-CAATGAAG-GCATAC-GGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTC 180 ||| || ||| |||| | ||| | |||||||| | |||||||| | | ||| || Sbjct 198028 CACTCAGCTAAGAGCATCCAGGGGGCGCCAAGAGGCAGGGGCTGGGACAGACGGTAGCTT 198087 Query 181 GCCGTGAGGCGGACCAT 197 ||| | |||||||||| Sbjct 198088 GCCTCGCGGCGGACCAT 198104 >seq1541 Length=351212 Score = 75.2 bits (82), Expect = 1e-11 Identities = 82/108 (76%), Gaps = 11/108 (10%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCAT--------GCTAATGTA 61 ||||| ||||||||| || | ||||||||| |||||||||| ||| ||| Sbjct 222946 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCATTATTCCTAGCTGCGGTA 222888 Query 62 TTCGGGCGTAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| |||| | ||||||||||||||||||||||| |||| ||||| Sbjct 222887 TTCAGGCGACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 222840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595024632876