Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq358 89.7 6e-16
seq2494 82.4 9e-14
seq1951 78.8 1e-12
seq1103 77.0 4e-12
seq1541 75.2 1e-11
>seq358
Length=502484
Score = 89.7 bits (98), Expect = 6e-16
Identities = 81/100 (81%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||| |||||||||| || | ||||||||| |||||||| ||| |||||| ||||
Sbjct 182341 AAACCCACAAAATAGGACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTATTCAGGCG 182399
Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
| ||||||||||||||||||||||| |||| |||||
Sbjct 182400 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 182439
>seq2494
Length=76471
Score = 82.4 bits (90), Expect = 9e-14
Identities = 65/77 (84%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG--TAAGCCTGCTTTGAACACTCT 90
||||||||| |||||||| ||| |||||| |||| | ||||||||||||||||||
Sbjct 23841 GTCCTATTCCATTATTCCCAGCTGCAGTATTCAGGCGACTGGGCCTGCTTTGAACACTCT 23782
Query 91 AATTTTCTCAAGGTAAA 107
||||||||||| |||||
Sbjct 23781 AATTTTCTCAAAGTAAA 23765
>seq1951
Length=113854
Score = 78.8 bits (86), Expect = 1e-12
Identities = 80/101 (79%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||| ||||||||| || | ||||||||| |||||||| ||| |||||||||||
Sbjct 7749 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCGGGCG 7807
Query 70 --TAAGCCTGCTTTGAACACTCTAA-TTTTCTCAAGGTAAA 107
| ||||||||||| |||| ||| |||| |||| |||||
Sbjct 7808 ACTGGGCCTGCTTTGAGCACTTTAATTTTTTTCAAAGTAAA 7848
>seq1103
Length=227817
Score = 77.0 bits (84), Expect = 4e-12
Identities = 142/197 (72%), Gaps = 10/197 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||| ||||||||| | | ||||||||| |||||||| ||| ||||| ||||
Sbjct 197909 AAACCCACAAAATAGAACTGGA-GTCCTATTCCATTATTCCTAGCTGCGATATTCAGGCG 197967
Query 70 TAAG--CCTGCTTTGAACACTCTAA-TTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
| ||||||||||||||||||| |||| |||| ||||| | | | | || | | |
Sbjct 197968 ACCGGGCCTGCTTTGAACACTCTAATTTTTTTCAAAGTAAACGCTTCGGACCCCACGGGA 198027
Query 126 CAC-CAATGAAG-GCATAC-GGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTC 180
||| || ||| |||| | ||| | |||||||| | |||||||| | | ||| ||
Sbjct 198028 CACTCAGCTAAGAGCATCCAGGGGGCGCCAAGAGGCAGGGGCTGGGACAGACGGTAGCTT 198087
Query 181 GCCGTGAGGCGGACCAT 197
||| | ||||||||||
Sbjct 198088 GCCTCGCGGCGGACCAT 198104
>seq1541
Length=351212
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/108 (76%), Gaps = 11/108 (10%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCAT--------GCTAATGTA 61
||||| ||||||||| || | ||||||||| |||||||||| ||| |||
Sbjct 222946 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCATTATTCCTAGCTGCGGTA 222888
Query 62 TTCGGGCGTAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
||| |||| | ||||||||||||||||||||||| |||| |||||
Sbjct 222887 TTCAGGCGACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 222840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595024632876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |