Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq358 93.3 4e-17 seq1951 89.7 5e-16 seq1541 87.8 2e-15 seq2494 82.4 8e-14 seq1103 82.4 8e-14 seq419 78.8 1e-12 >seq358 Length=502484 Score = 93.3 bits (102), Expect = 4e-17 Identities = 82/100 (82%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||||||||||||| | || |||||| | | | Sbjct 182439 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACTGCAGCTAG 182380 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||| ||||||||| | |||| ||||||||| ||||| Sbjct 182379 GAATAATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 182341 >seq1951 Length=113854 Score = 89.7 bits (98), Expect = 5e-16 Identities = 130/180 (72%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69 ||||||||||||||| ||| || | |||||||||||| | || ||||||| | | Sbjct 7848 TTTACTTTGAAAAAAATTAAAGTGCTCAAAGCAGGCCCAGTCGCCCGAATACCGCAGCTA 7789 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT----TTCTAGGACCGCCCGTA 125 |||||||| ||||||||| | |||||||||||||| ||| |||| || || Sbjct 7788 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTTCTCTGAATTGGGGTC 7730 Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||||| || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 7729 ATGATTAAAAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 7670 >seq1541 Length=351212 Score = 87.8 bits (96), Expect = 2e-15 Identities = 85/108 (79%), Gaps = 11/108 (10%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACC--- 67 ||||||||||||||||||||| |||||||||||||| | || |||||| | | Sbjct 222840 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 222899 Query 68 -----ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||||| ||||||||| | |||||||||||||| ||||| Sbjct 222900 GAATAATGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 222946 >seq2494 Length=76471 Score = 82.4 bits (90), Expect = 8e-14 Identities = 76/94 (81%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||||||||| |||||||||| |||||||||||||| | || |||||| | | | Sbjct 23765 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCCAGTCGCCTGAATACTGCAGCTGG 23824 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 104 ||||||| ||||||||| | | |||||||||||| Sbjct 23825 GAATAATGGAATAGGAC-TCCAGTTCTATTTTGT 23857 >seq1103 Length=227817 Score = 82.4 bits (90), Expect = 8e-14 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69 ||||||||||||||| |||||| |||||||||||||| | || ||||| | | Sbjct 198008 TTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATATCGCAGCTA 197949 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| | | |||||||||||| ||||| Sbjct 197948 GGAATAATGGAATAGGAC-TCCAGTTCTATTTTGTGGGTTT 197909 >seq419 Length=461954 Score = 78.8 bits (86), Expect = 1e-12 Identities = 75/94 (80%), Gaps = 3/94 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 |||| |||||||||||||| | |||||||||||||| | || |||||| | | Sbjct 332133 TTTAGTTTGAAAAAATTAGGGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGTCAG 332074 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 104 ||||||| ||||||||| | |||||||||||||| Sbjct 332073 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGT 332041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511849146560