Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq358 93.3 4e-17
seq1951 89.7 5e-16
seq1541 87.8 2e-15
seq2494 82.4 8e-14
seq1103 82.4 8e-14
seq419 78.8 1e-12
>seq358
Length=502484
Score = 93.3 bits (102), Expect = 4e-17
Identities = 82/100 (82%), Gaps = 3/100 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70
||||||||||||||||||||| |||||||||||||| | || |||||| | | |
Sbjct 182439 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACTGCAGCTAG 182380
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
||||||| ||||||||| | |||| ||||||||| |||||
Sbjct 182379 GAATAATGGAATAGGAC-TCCGGTCCTATTTTGTGGGTTT 182341
>seq1951
Length=113854
Score = 89.7 bits (98), Expect = 5e-16
Identities = 130/180 (72%), Gaps = 8/180 (4%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69
||||||||||||||| ||| || | |||||||||||| | || ||||||| | |
Sbjct 7848 TTTACTTTGAAAAAAATTAAAGTGCTCAAAGCAGGCCCAGTCGCCCGAATACCGCAGCTA 7789
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT----TTCTAGGACCGCCCGTA 125
|||||||| ||||||||| | |||||||||||||| ||| |||| || ||
Sbjct 7788 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTTCTTCTCTGAATTGGGGTC 7730
Query 126 ATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
||||| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 7729 ATGATTAAAAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 7670
>seq1541
Length=351212
Score = 87.8 bits (96), Expect = 2e-15
Identities = 85/108 (79%), Gaps = 11/108 (10%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACC--- 67
||||||||||||||||||||| |||||||||||||| | || |||||| | |
Sbjct 222840 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 222899
Query 68 -----ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
|||||||||| ||||||||| | |||||||||||||| |||||
Sbjct 222900 GAATAATGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 222946
>seq2494
Length=76471
Score = 82.4 bits (90), Expect = 8e-14
Identities = 76/94 (81%), Gaps = 3/94 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70
|||||||||| |||||||||| |||||||||||||| | || |||||| | | |
Sbjct 23765 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCCAGTCGCCTGAATACTGCAGCTGG 23824
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 104
||||||| ||||||||| | | ||||||||||||
Sbjct 23825 GAATAATGGAATAGGAC-TCCAGTTCTATTTTGT 23857
>seq1103
Length=227817
Score = 82.4 bits (90), Expect = 8e-14
Identities = 81/101 (80%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69
||||||||||||||| |||||| |||||||||||||| | || ||||| | |
Sbjct 198008 TTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATATCGCAGCTA 197949
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
|||||||| ||||||||| | | |||||||||||| |||||
Sbjct 197948 GGAATAATGGAATAGGAC-TCCAGTTCTATTTTGTGGGTTT 197909
>seq419
Length=461954
Score = 78.8 bits (86), Expect = 1e-12
Identities = 75/94 (80%), Gaps = 3/94 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70
|||| |||||||||||||| | |||||||||||||| | || |||||| | |
Sbjct 332133 TTTAGTTTGAAAAAATTAGGGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGTCAG 332074
Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGT 104
||||||| ||||||||| | ||||||||||||||
Sbjct 332073 GAATAATGGAATAGGAC-TCCGGTTCTATTTTGT 332041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511849146560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |