Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017-
04-25] 30,414 sequences; 991,584,656 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq395 168 1e-39
seq1103 158 2e-36
seq236 152 1e-34
seq1141 129 1e-27
seq2503 104 4e-20
seq926 98.7 2e-18
seq1444 86.0 1e-14
seq2541 75.2 2e-11
>seq395
Length=478428
Score = 168 bits (186), Expect = 1e-39
Identities = 172/223 (77%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||| | |||| ||||||||| ||
Sbjct 417633 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGTCAC 417691
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||||| | || || || | |||| ||| ||| ||||||| | || |
Sbjct 417692 ACTGAGTGGATCAGCGTGTGTCTACCCTTCACCGAGAGGCGTGGGTAACACGCTGAACCC 417751
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| || || | ||||| | | |||||||||||| | | | |||||||||| || ||||||
Sbjct 417752 CACTCTTGATAGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAG 417811
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||||| ||| ||||||||||| ||||||||||||||||
Sbjct 417812 CGCGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 417854
>seq1103
Length=227817
Score = 158 bits (174), Expect = 2e-36
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||||||||||||||||| | |||| ||||| |||| ||||||| |
Sbjct 197348 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGAGCGCCACACTGAGTG 197289
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
| || || | |||| |||| ||| ||||||| | | || | | || ||
Sbjct 197288 GATCGGCGTGTGTCTACCCTTTGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCATG 197229
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
| || || | | |||||||||||| | | | |||||||||| || |||||||||| |||
Sbjct 197228 ATAGGCATTGTGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTC 197169
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| ||| |||| ||||| ||||||||||||||||
Sbjct 197168 ATAAGCTTGCGTAGATTAAGTCCCTGCCCTTTGTA 197134
>seq236
Length=607901
Score = 152 bits (168), Expect = 1e-34
Identities = 167/221 (76%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||| ||||||||||||||||||||||||| | |||| |||| |||| ||
Sbjct 162555 AGATTGAG-CAATGACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACACGCGTCAC 162497
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||||| | || || || | |||| | || ||| ||||||| | | || |
Sbjct 162496 ACTGAGTGGATCAGCGTGTGTCTACCCTTCGTCGAGAGGCGTGGGTAACCCGCTGAACCC 162437
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||| | ||||| | |||||||||||| | | |||||||||| || ||||||
Sbjct 162436 CACTCGTGATAGGGATTTGGGATTGCAATTATTTCCCACGAACGAGGAATTCCCAGTAAG 162377
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326
|| | ||||| ||| ||||||||||| ||||||||||||||
Sbjct 162376 CGTGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTG 162336
>seq1141
Length=230261
Score = 129 bits (142), Expect = 1e-27
Identities = 166/225 (74%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 52469 CTTCTTAGAGGGACAAATGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 52526
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| ||||||||| ||||||| | || || || |
Sbjct 52527 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGTCACACTGAGTGGATCAGCGTGTGTCTAC 52586
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| ||| ||| ||||||| | || | | || || | ||||| | | ||||
Sbjct 52587 CCTTCACCGAGAGGCGTGGGTAACACGCTGAACCCCACTCTTGATAGGGATTGGGGATTG 52646
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295
|||||||| | | | |||||||||| || |||||||||| |||||
Sbjct 52647 CAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTCAT 52691
>seq2503
Length=76087
Score = 104 bits (114), Expect = 4e-20
Identities = 158/220 (72%), Gaps = 14/220 (6%)
Strand=Plus/Minus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||||||||||||||||| | |||| |||| |||| ||||||| |
Sbjct 45249 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACATGCGCCACACTGAGTG 45190
Query 174 AGCCAACGAGT----TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT 229
| | || || ||||| | ||| ||||||| || | || | | |
Sbjct 45189 GTTCCTTGTGTGTACTCTTCACCAAG------AGGCATGGGTAACCTGCTGAACCCCACT 45136
Query 230 CGTGCT-GGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||| | |||| | | | | |||||||||| | | | || ||||||| || |||||||||
Sbjct 45135 CGTAATAGGGGCTGGGGTA-TGCAATTATTTC-CATGAATGAGGAATTCCCAGTAAGCGC 45078
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| || || ||| | |||||||| | |||||||||||||
Sbjct 45077 GAGTTATAAGCTTGTGTTGATTA-ATACCTGCCCTTTGTA 45039
>seq926
Length=264063
Score = 98.7 bits (108), Expect = 2e-18
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296
||||| | | |||||||||||| | | | || ||||||| || |||||||||| |||||
Sbjct 260859 GGGATTGGGGATTGCAATTATTTCCCATAAATGAGGAATTCCCAGTAAGCGCGGGTCATA 260800
Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| | ||||||||| ||||||||||||||||
Sbjct 260799 AGCTCACGTTGATTAAGTCCCTGCCCTTTGTA 260768
>seq1444
Length=172893
Score = 86.0 bits (94), Expect = 1e-14
Identities = 74/92 (80%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296
||||| | | |||||||||||| | | | ||| |||||| || |||||| ||| |||||
Sbjct 117732 GGGATTGGGGATTGCAATTATTTCCCATGAACCAGGAATTCCCAGTAAGTGCGGGTCATA 117673
Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| || ||||||| |||||||||||||||
Sbjct 117672 AGCTTGCATTGATTAAATCCCTGCCCTTTGTA 117641
>seq2541
Length=74327
Score = 75.2 bits (82), Expect = 2e-11
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||| || |||||||||| ||||| ||| ||||||||||| | ||||||||||||||
Sbjct 53225 AGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATTAAGCCCCTGCCCTTTGTA 53167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946911918592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |