Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq395 168 1e-39 seq1103 158 2e-36 seq236 152 1e-34 seq1141 129 1e-27 seq2503 104 4e-20 seq926 98.7 2e-18 seq1444 86.0 1e-14 seq2541 75.2 2e-11 >seq395 Length=478428 Score = 168 bits (186), Expect = 1e-39 Identities = 172/223 (77%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| ||||||||| || Sbjct 417633 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGTCAC 417691 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| | || || || | |||| ||| ||| ||||||| | || | Sbjct 417692 ACTGAGTGGATCAGCGTGTGTCTACCCTTCACCGAGAGGCGTGGGTAACACGCTGAACCC 417751 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | || || | ||||| | | |||||||||||| | | | |||||||||| || |||||| Sbjct 417752 CACTCTTGATAGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAG 417811 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| ||||| ||| ||||||||||| |||||||||||||||| Sbjct 417812 CGCGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 417854 >seq1103 Length=227817 Score = 158 bits (174), Expect = 2e-36 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | |||| ||||| |||| ||||||| | Sbjct 197348 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGAGCGCCACACTGAGTG 197289 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | || || | |||| |||| ||| ||||||| | | || | | || || Sbjct 197288 GATCGGCGTGTGTCTACCCTTTGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCATG 197229 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 | || || | | |||||||||||| | | | |||||||||| || |||||||||| ||| Sbjct 197228 ATAGGCATTGTGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTC 197169 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| |||| ||||| |||||||||||||||| Sbjct 197168 ATAAGCTTGCGTAGATTAAGTCCCTGCCCTTTGTA 197134 >seq236 Length=607901 Score = 152 bits (168), Expect = 1e-34 Identities = 167/221 (76%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||| ||||||||||||||||||||||||| | |||| |||| |||| || Sbjct 162555 AGATTGAG-CAATGACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACACGCGTCAC 162497 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 ||||| | || || || | |||| | || ||| ||||||| | | || | Sbjct 162496 ACTGAGTGGATCAGCGTGTGTCTACCCTTCGTCGAGAGGCGTGGGTAACCCGCTGAACCC 162437 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | ||||| | ||||| | |||||||||||| | | |||||||||| || |||||| Sbjct 162436 CACTCGTGATAGGGATTTGGGATTGCAATTATTTCCCACGAACGAGGAATTCCCAGTAAG 162377 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 || | ||||| ||| ||||||||||| |||||||||||||| Sbjct 162376 CGTGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTG 162336 >seq1141 Length=230261 Score = 129 bits (142), Expect = 1e-27 Identities = 166/225 (74%), Gaps = 3/225 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 52469 CTTCTTAGAGGGACAAATGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 52526 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||||||||| ||||||| | || || || | Sbjct 52527 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGTCACACTGAGTGGATCAGCGTGTGTCTAC 52586 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| ||| ||| ||||||| | || | | || || | ||||| | | |||| Sbjct 52587 CCTTCACCGAGAGGCGTGGGTAACACGCTGAACCCCACTCTTGATAGGGATTGGGGATTG 52646 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295 |||||||| | | | |||||||||| || |||||||||| ||||| Sbjct 52647 CAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTCAT 52691 >seq2503 Length=76087 Score = 104 bits (114), Expect = 4e-20 Identities = 158/220 (72%), Gaps = 14/220 (6%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||| | |||| |||| |||| ||||||| | Sbjct 45249 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACATGCGCCACACTGAGTG 45190 Query 174 AGCCAACGAGT----TCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGT 229 | | || || ||||| | ||| ||||||| || | || | | | Sbjct 45189 GTTCCTTGTGTGTACTCTTCACCAAG------AGGCATGGGTAACCTGCTGAACCCCACT 45136 Query 230 CGTGCT-GGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||| | |||| | | | | |||||||||| | | | || ||||||| || ||||||||| Sbjct 45135 CGTAATAGGGGCTGGGGTA-TGCAATTATTTC-CATGAATGAGGAATTCCCAGTAAGCGC 45078 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || || ||| | |||||||| | ||||||||||||| Sbjct 45077 GAGTTATAAGCTTGTGTTGATTA-ATACCTGCCCTTTGTA 45039 >seq926 Length=264063 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 ||||| | | |||||||||||| | | | || ||||||| || |||||||||| ||||| Sbjct 260859 GGGATTGGGGATTGCAATTATTTCCCATAAATGAGGAATTCCCAGTAAGCGCGGGTCATA 260800 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| | ||||||||| |||||||||||||||| Sbjct 260799 AGCTCACGTTGATTAAGTCCCTGCCCTTTGTA 260768 >seq1444 Length=172893 Score = 86.0 bits (94), Expect = 1e-14 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 ||||| | | |||||||||||| | | | ||| |||||| || |||||| ||| ||||| Sbjct 117732 GGGATTGGGGATTGCAATTATTTCCCATGAACCAGGAATTCCCAGTAAGTGCGGGTCATA 117673 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| || ||||||| ||||||||||||||| Sbjct 117672 AGCTTGCATTGATTAAATCCCTGCCCTTTGTA 117641 >seq2541 Length=74327 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| || |||||||||| ||||| ||| ||||||||||| | |||||||||||||| Sbjct 53225 AGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATTAAGCCCCTGCCCTTTGTA 53167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946911918592