Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthochromis_20polyacanthus_20[refseq_20GCF_5F002109545.1_202017- 04-25] 30,414 sequences; 991,584,656 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq49 223 3e-53 seq277 127 2e-24 seq4 89.7 4e-13 >seq49 Length=1117640 Score = 223 bits (246), Expect = 3e-53 Identities = 757/1162 (65%), Gaps = 43/1162 (4%) Strand=Plus/Minus Query 65417 TGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTG 65476 ||| | |||| || || ||||| || ||||| || | ||| ||||||||| ||| Sbjct 732422 TGAGGGTTGACGATCTGAAACTCTCCCGACAGAACCCTGCGGGTGTAGATGTTGCTGGTG 732363 Query 65477 ATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGA 65536 || ||| | ||| || ||||||| || || ||||| || || || || ||||| || Sbjct 732362 TAGGCTTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGG 732303 Query 65537 GCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAG 65596 || | || || ||| | || || | | | || || | || | |||| Sbjct 732302 GCCAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATTTTCTCCTTCAGCAGCTTCCAG 732243 Query 65597 TTCCACA--TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 | ||| | ||||| || || | || | ||||| || | |||||| | || Sbjct 732242 TCCCAGAGATCGGT----CGGCGTCTTCTCC----CACATGTCGTACTGCAGGATGCCCT 732191 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGC 65714 | ||| |||| || || | | | ||||| || ||| || || | |||| Sbjct 732190 TGCTGACCGGGGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCGGCCGCCAGCTCGCAGC 732131 Query 65715 TGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCT 65774 | | ||| || ||||| | |||||||| ||||| ||| | || || | |||| Sbjct 732130 TCGCCTCCAGAGCGGCGTAGTAAATGGTTTCGAAGATGTGGATGTTGAGCAGTTGAGCCT 732071 Query 65775 CATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAA 65834 | ||| || |||| || ||| || | || | |||||| | ||| || ||||| | Sbjct 732070 CTGGGCTTTCAAACGGGTGACGCATGAGAATGAAGGCGTCGGCTAAACCCTGGACTCCGA 732011 Query 65835 TACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCT-CAGGTACAGGGTAGTAATTG 65893 | ||||| || | || ||| || || ||||| || | ||||| |||||||| ||| Sbjct 732010 TTCCGATCGGCCTGTGGCGCTTGTTCGAGT-TCTCGGCTTCCGGTACCGGGTAGTAGTTG 731952 Query 65894 ATATCGATAATGCGATTCAAATTGCGTGTC-ACCACATG---CACGATACGTCGCAATTG 65949 || |||||||| |||| || || | | || | ||| ||| | | | || Sbjct 731951 ATCTCGATAATCTTGTTCAGGTTTT-TGACGATTACTTTGGTCAC-ATATGCC--AGTTT 731896 Query 65950 TTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGC 66009 | ||||||||| | || || || ||| || ||| ||| ||||| Sbjct 731895 CTTAAAATCAAAA------GTCCGCTCTGGGGTGACGTACATG------TTG---AGGGC 731851 Query 66010 AAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGT 66069 | || || ||||| ||||| |||| |||||| ||| || || ||||||||||| Sbjct 731850 GATGGAGGCCAGGTTACAGACCGCTACCTCGTCCTTGCTGGTGTATTCAACAATTTCGGT 731791 Query 66070 GCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGC 66129 |||||| || ||||| ||||||||||| |||||| || || ||||| | ||||| || Sbjct 731790 GCACAGGTTGCTGCACTTTATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGC 731731 Query 66130 ATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 || ||||||| |||||| || || || ||||| || |||||||||||||||| ||| Sbjct 731730 GTCTTTGTACAGCATGTATGGCGTTCCAGTCTCTGTCTGCGACTCAATGATGGCGTACCA 731671 Query 66190 AAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA-ATGTTCGTAGA 66248 || | ||||||||| ||| ||| | || | || || || | ||||| Sbjct 731670 CAGCTGCTGAGCCTTCACCACACGCTTGGCCTTGCCCTCCTTCTCATACCTGGT-GTAGA 731612 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | | || || || ||||| || ||||| || || || |||||||||| Sbjct 731611 GCTTCTCAAACTCCTCCCCCCAGCACTCATCCAGACCAGGGCAGGCGTTGGGACACATCA 731552 Query 66309 GCGACCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 | ||||| | || || ||| || | ||| || |||||||| ||||| | ||| Sbjct 731551 GAGACCAGT--CCTGGTTGCTCTCCACTCTCTTCATGAACAGATCAGGGATCCACATGGC 731494 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGA 66425 |||||| || || | || | |||||||| | || ||| || || || || |||| Sbjct 731493 GTAGAAAAGGTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGA 731435 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 | || || | ||| ||||| || || ||||| |||||||| | || | ||| Sbjct 731434 AGTCGAACACGTCAAAGTGCCAGGGCTCTAGGTACATGGCGAAGGCTCCGGGTCTCTTGT 731375 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 ||| || |||||||||||||| || |||||| | || | || ||| || ||||||| Sbjct 731374 TGCCCCCCTGGTCGACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCC 731315 Query 66546 CGTTAGATTTGCCATTGGTGCC 66567 |||| || || || |||||||| Sbjct 731314 CGTTGGAGTTTCCGTTGGTGCC 731293 >seq277 Length=566994 Score = 127 bits (140), Expect = 2e-24 Identities = 102/123 (83%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||| ||||| ||| ||||||| || |||||||| || ||||||| Sbjct 256867 TGGAGCGTTTCACACAGGAAGTGCAGGTGACGGAGGCCCGCTGTTTCTATGGTTTCCAGA 256926 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | || ||||| || ||||||| || Sbjct 256927 TCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTCCTGATCGACACCTACATCAAGG 256986 Query 61376 AGC 61378 ||| Sbjct 256987 AGC 256989 Score = 127 bits (140), Expect = 2e-24 Identities = 102/123 (83%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||| ||||| ||| ||||||| || |||||||| || ||||||| Sbjct 272729 TGGAGCGTTTCACACAGGAAGTGCAGGTGACGGAGGCCCGCTGTTTCTATGGTTTCCAGA 272670 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | || ||||| || ||||||| || Sbjct 272669 TCGCCATGGAGAACATCCACTCAGAGATGTACAGCCTCCTGATCGACACCTACATCAAGG 272610 Query 61376 AGC 61378 ||| Sbjct 272609 AGC 272607 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 61037 TGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCA 61096 || |||| ||||||||||| ||||| | ||||||||| |||| | || || |||| | Sbjct 256515 TGAAAGATAATCCTCGTCGCTTCGTCATCTTCCCCATCCAGTACCACGACATCTGGCAGA 256574 Query 61097 TGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 ||||||| ||||| || || || |||||||||| |||||||| Sbjct 256575 TGTACAAGAAGGCCGAGGCCTCTTTCTGGACGGCAGAGGAGGT 256617 >seq4 Length=2013838 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 || |||||||| | | || || |||| |||||| |||||||||| ||| |||| | Sbjct 551637 CAAGAGGTGCAGATCCCTGAAGCTCGTTCCTTCTACAGCTTCCAGATCCTCATAGAGACT 551696 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | |||||| | || ||||||||||| Sbjct 551697 GTTCACTCAGAGATGTACAGTATGCTCATCAACACTTACATCAGGGA 551743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397420633220960