Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2690 279 8e-73 seq1646 138 2e-30 seq677 84.2 3e-14 >seq2690 Length=7015 Score = 279 bits (308), Expect = 8e-73 Identities = 202/229 (88%), Gaps = 5/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 2864 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 2921 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | ||| | |||||| Sbjct 2922 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGAGTTTAACAAGATT 2981 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||||||||| || |||| || | | ||||||||||||||||||| Sbjct 2982 ACCCGGGCCTTTCGGCCAAGGAAGTA--CTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCG 3039 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3040 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 3088 >seq1646 Length=871298 Score = 138 bits (152), Expect = 2e-30 Identities = 170/227 (75%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| || | ||| Sbjct 686234 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGGA-TTC 686291 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 |||||| | | || | ||||||| | ||||| ||||| | || || | | || Sbjct 686292 CTCGTTCATGGGAAATAGTTGCAATCCCCAATCCCTATCACAAGTGGGGTTCAACGGGTT 686351 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 | | ||| |||| |||| | | || | ||| ||||||| ||| || ||| Sbjct 686352 AACTACGCCTCTCGGTGAAGGGTAGACACATGCTGATCCGCTCAGTGTGGCGTGCATGCA 686411 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 |||| | |||||||||||||||||||||||||||||| ||||| ||| Sbjct 686412 GCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTT 686457 >seq677 Length=1509994 Score = 84.2 bits (92), Expect = 3e-14 Identities = 86/109 (79%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 110 TTCAAAGA-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGT 167 ||||||| |||||| |||| || || |||| | | || || ||| | || ||||||| Sbjct 716567 TTCAAAGGGTTACCCACACCTCTCAGCGAAGGGTAGACACACGCTGA-TCCACTCAGTGT 716625 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 || || |||| |||| |||||||||||||||||||||||||||||| Sbjct 716626 GGCACGYGTGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTG 716674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751951649455