Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq4078 425 1e-116 >seq4078 Length=1807 Score = 425 bits (470), Expect = 1e-116 Identities = 338/403 (84%), Gaps = 5/403 (1%) Strand=Plus/Minus Query 10 AGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTT 69 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 1065 AGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTT 1006 Query 70 AATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCC 129 ||||||||||||||||||||||||| ||| ||| |||| |||| | |||||||||| Sbjct 1005 AATCGGAATTACTGGGCGTAAAGCGCGCGTAGGTGGTTTGTTAAGTTGGATGTGAAATCC 946 Query 130 CCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGT 189 ||||||| |||||||||| |||||| |||| ||||||||| || |||||| ||| Sbjct 945 CCGGGCTCAACCTGGGAACTGCATTCAAAACTGACTGACTAGAGTATGGTAGAGGGTGGT 886 Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||||||| ||||||||||||||||| | |||||||||| |||||||||| Sbjct 885 GGAATTTCCTGTGTAGCGGTGAAATGCGTAGATATAGGAAGGAACACCAGTGGCGAAGGC 826 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 || ||||| ||| |||||| || | | ||||||||||||||||||||||||||||| Sbjct 825 GACCACCTGGACTAATACTGACACTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGA 766 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGG--GGATTTA-CTTCCT 366 ||||||||||||||||||| |||||||| |||||||| ||||| | || | ||| | Sbjct 765 TACCCTGGTAGTCCACGCCGTAAACGATGTCAACTAGCCGTTGGAAGCCTTGAGCTT--T 708 Query 367 TGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || || ||||||||| | |||||||||||||||||| ||| Sbjct 707 TAGTGGCGCAGCTAACGCATTAAGTTGACCGCCTGGGGAGTAC 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289514409248