Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09-
07] 6,637 sequences; 844,902,565 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq5308 215 1e-53
seq2676 84.2 5e-14
>seq5308
Length=1285
Score = 215 bits (238), Expect = 1e-53
Identities = 241/326 (74%), Gaps = 27/326 (8%)
Strand=Plus/Minus
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1285 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 1226
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT 184
|||||||||||||||||||||| ||||||| | | |||||| | |||||
Sbjct 1225 TATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 1166
Query 185 CCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGC 244
| |||||||||| ||||||||||||||||| ||||||| || ||| || || ||
Sbjct 1165 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGC 1106
Query 245 AGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT-AG- 302
||| |||||||||| ||||||||||| ||||| | ||| || || | ||| ||
Sbjct 1105 AGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC-GGCATGAGC 1047
Query 303 ------------------------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTT 338
|| ||| | ||||||||| ||||||||| | |||||
Sbjct 1046 TTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTT 987
Query 339 TGCCGAGTTCCTTAACAATAGTTCTC 364
|||| |||||||| || |||||||
Sbjct 986 TGCCTAGTTCCTTCACCCGAGTTCTC 961
>seq2676
Length=7184
Score = 84.2 bits (92), Expect = 5e-14
Identities = 107/146 (73%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||||| || | ||||||| ||||||||
Sbjct 5908 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 5849
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|| ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 5848 ACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 5790
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
|||| ||||||| || || |||| ||
Sbjct 5789 GTTAAGGCCGCCTTTAACCGGGGTTT 5764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062329488512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |