Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq4078 544 2e-152 seq2676 111 5e-22 >seq4078 Length=1807 Score = 544 bits (602), Expect = 2e-152 Identities = 424/500 (85%), Gaps = 8/500 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 667 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 608 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||| |||||||||| ||| | || Sbjct 607 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGCCTTGACATCCAATGAACTTTC 548 Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178 |||||||||| ||| |||||||| ||| | |||||||| ||||||| ||||||| Sbjct 547 TAGAGATAGATTGGTG---CCTTCGGGA-ACATTGAGACAGGTGCTGCATGGCTGTCGTC 492 Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 491 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTT 432 Query 239 GCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296 ||| || ||| | ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 431 ACCAGCACGTAATGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGG 372 Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356 ||| |||||||| |||||||| |||||| | |||||||||||||||||||||||| | Sbjct 371 GGATGACGTCAAGTCATCATGGCCCTTACGGCCTGGGCTACACACGTGCTACAATGGTCG 312 Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416 |||| |||| || || ||||||||| ||| ||||||||||| | || ||| ||| Sbjct 311 GTACAGAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCATAAAACCGATCGTAGTCCGG 252 Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATG 476 || | |||||||||||||||| ||||| ||||||||||||||||| ||||| ||| Sbjct 251 ATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAATCGCGAATCAGAATG 192 Query 477 CTACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 191 TCGCGGTGAATACGTTCCCG 172 >seq2676 Length=7184 Score = 111 bits (122), Expect = 5e-22 Identities = 144/197 (73%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||| | |||||| ||| | | Sbjct 1261 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATATGCC 1320 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTTC 414 | |||||| | |||||| | || || ||| |||| |||||| | | | | | || Sbjct 1321 TAAACAAAGAGATGCGAAAATGTGAATTCTAGCTAATCTCATAAAATAGGATATAAATTT 1380 Query 415 ---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCA 471 ||||||||||||| || ||||||||||||| || ||| ||||||||||| |||| Sbjct 1381 TAAGGATTGTAGTCTGAAATTCGACTATATGAATATGTAATTACTAGTAATCGTGAATCA 1440 Query 472 GCATGCTACGGTGAATA 488 |||| |||||||||| Sbjct 1441 CCATGTCACGGTGAATA 1457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503900179520