Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2690 443 4e-122 seq1646 152 1e-34 >seq2690 Length=7015 Score = 443 bits (490), Expect = 4e-122 Identities = 284/309 (92%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 3171 GAACGAGACCTTAACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 3112 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3111 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3052 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| |||||| ||||| | | ||||||||| Sbjct 3051 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACTT--CCTTGGCCG 2994 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 |||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2993 AAAGGCCCGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 2934 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| Sbjct 2933 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 2874 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 2873 CCCTTTGTA 2865 >seq1646 Length=871298 Score = 152 bits (168), Expect = 1e-34 Identities = 169/224 (75%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 ||| ||||| |||||||||||||||||||||||||||||| | |||| ||| || ||| | Sbjct 686457 AAGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCAGGGCTGCATGCACGCCA 686399 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 |||||| | || | || | |||| ||| ||| | | ||| | | || | Sbjct 686398 CACTGAGCGGATCAGCATGTGTCTACCCTTCACCGAGAGGCGTAGTTAACCCGTTGAACC 686339 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | | ||| | ||||| | | ||||||| |||| | | | |||||||||| || ||||| Sbjct 686338 CCACTTGTGATAGGGATTGGGGATTGCAACTATTTCCCATGAACGAGGAATCCCCAGTAA 686279 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| ||||| ||| ||||||||||| |||||||||||||||| Sbjct 686278 GCGCGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 686235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947137134336