Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4078 181 2e-43 >seq4078 Length=1807 Score = 181 bits (200), Expect = 2e-43 Identities = 213/286 (74%), Gaps = 9/286 (3%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||| ||||||||| |||| ||| | | |||| Sbjct 1032 GGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGTCGGTAACGTCAAAACACTA-ACGT 1090 Query 61 GGAAGGTT-------TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113 ||||| || |||| | |||| ||||||||||| ||| ||||| || Sbjct 1091 ATTAGGTTAATGCCCTTCCTCCCAACTTAAAGTGCTTTACAATCCGAAGA-CCTTCTTCA 1149 Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173 ||||| | ||||||| |||| || ||| |||||| |||||||||| ||||||||||| Sbjct 1150 CACACGCGGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCT 1209 Query 174 CCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCC 233 ||||||||||| |||||||||||||||||||| |||| || | |||||||||| | Sbjct 1210 CCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGT 1269 Query 234 TATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || ||||| | || |||| ||| ||||| | || |||| ||||| Sbjct 1270 TACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 1315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068729063744