Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amphilophus_20citrinellus_20[genbank_20GCA_5F000751415.1_202014-09- 07] 6,637 sequences; 844,902,565 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2690 749 0.0 seq1794 288 3e-75 seq399 277 5e-72 seq1461 205 3e-50 seq190 192 2e-46 seq1646 176 1e-41 seq60 158 4e-36 seq541 152 2e-34 seq1620 149 2e-33 seq244 147 7e-33 seq385 145 2e-32 seq1357 140 1e-30 seq489 131 5e-28 seq40 131 5e-28 seq984 120 9e-25 seq1230 116 1e-23 seq474 116 1e-23 seq409 105 2e-20 seq1189 104 7e-20 seq1817 102 2e-19 seq319 87.8 5e-15 >seq2690 Length=7015 Score = 749 bits (830), Expect = 0.0 Identities = 470/504 (93%), Gaps = 2/504 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3976 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 4035 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4036 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 4095 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 4096 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGTTT 4155 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || || | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 4156 GGCCAATACCCAAACATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 4215 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| |||||||||||| |||||| | ||||| ||||| Sbjct 4216 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAAAGAGCCCAG-AGGGCATTGGT 4274 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 4275 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 4334 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||| Sbjct 4335 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTTATATAATGA 4394 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4395 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 4453 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 4454 AGACAAGCATATGACTACTGGCAG 4477 >seq1794 Length=89003 Score = 288 bits (318), Expect = 3e-75 Identities = 202/228 (89%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || |||||||| ||||| | ||||| | ||||||||| Sbjct 64373 GTACTCATTCCAATTACAGGGCCTCAAAAGAGTCCTGTCTTGTTATTT-TCGTCACTACC 64315 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 64314 TCCCCGAGTCGGGAGTGGGTAATTTGCACGCCTACTGCCTTCCTTGGATGTGGTAGCCGT 64255 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 64254 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 64195 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 |||| || | |||||||||||||| |||||||||| ||| |||||| Sbjct 64194 AGGCACGTAACGTACCATCGAAAGTTCATAGGGCAGACATTCGAATGA 64147 Score = 250 bits (276), Expect = 8e-64 Identities = 199/238 (84%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || |||||||| ||||||| ||||| | ||||||||| Sbjct 56670 GTACTCATTCCAATTACAGGGCCTCAAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 56611 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| |||||||||||| ||||||||||||||||||||||| || Sbjct 56610 TCCCCGAGTCGGGAGTGGGTAATTTGCACGCCTGCTGCCTTCCTTGGATGT-------GT 56558 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||| |||||||||||| |||||||||||||||| | |||||||| Sbjct 56557 GTCTCAGGCTCCCTCT--TGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 56500 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || |||||| |||||||||||||||||| ||| |||||| | |||||| Sbjct 56499 AGGCACGTAAAGTACCATAGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCG 56442 Score = 174 bits (192), Expect = 5e-41 Identities = 141/168 (84%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT-AAGGTACTATCA 396 || || | ||||||||||||||||||| |||| |||||||| ||| || | | |||| Sbjct 64065 TTGTTTGTATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGAATGAGCGATCA 64006 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| |||||||||||||||||||||| |||||||||||||| | || | |||| Sbjct 64005 AAGGAACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCGGCCGCGTGTACT 63946 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct 63945 TAGACCTGCATGGCTTAGTCTTTGAGACAAGCATATG-CTACTGGCAG 63899 Score = 143 bits (158), Expect = 8e-32 Identities = 119/143 (83%), Gaps = 8/143 (6%) Strand=Plus/Minus Query 366 CCACGGTTATCCATGTAGTAAGGTA----CTATCAAATAAACGATAACTGATTTAATGAG 421 |||| |||||||| ||||| | | | |||||| ||| ||||||||||||||||| Sbjct 56249 CCACAGTTATCCA---AGTAACGGATGAGCGATCAAAGGAACCATAACTGATTTAATGAG 56193 Query 422 CCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGA 481 |||||| ||||||||||||| | || | ||||||||| ||||||||||||||||||| Sbjct 56192 CCATTCACAGTTTCACTGTACCGGCCGCGTGTACTTAGACCTGCATGGCTTAATCTTTGA 56133 Query 482 GACAAGCATATGACTACTGGCAG 504 |||||||||||| |||||||||| Sbjct 56132 GACAAGCATATG-CTACTGGCAG 56111 >seq399 Length=104734 Score = 277 bits (306), Expect = 5e-72 Identities = 199/228 (87%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| |||||||| ||||| | ||||||||| Sbjct 73062 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATCGTTATTTTTCGTCACTACC 73121 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | |||| ||| ||| |||||||||||||||||||||||||||||||||||||||| || | Sbjct 73122 TTCCCGAGTCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTATCCAT 73181 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||| |||||||||||| |||||||||||||| | | |||||||| Sbjct 73182 TTCTCAGGCTCCCTCTCCAGAATCGAACCCTGATTCCCCGTTACCCATGGTCACCATGGT 73241 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 |||| || ||||||||||||||||||||||||| ||| |||||| Sbjct 73242 AGGCAGGTAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGA 73289 Score = 185 bits (204), Expect = 3e-44 Identities = 143/168 (85%), Gaps = 8/168 (5%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA----CTATCA 396 || ||||||||||||||||||||| |||| |||||||| ||||| | | | |||| Sbjct 73320 TTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCA---AGTAACGGATGAGCGATCA 73376 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| |||||| |||||||||||||||||||||||||||||| | ||| | |||| Sbjct 73377 AAGGAACCATAACTAATTTAATGAGCCATTCGCAGTTTCACTGTACTGGCTGCGTGTACT 73436 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 73437 TAGACCTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 73483 >seq1461 Length=366368 Score = 205 bits (226), Expect = 3e-50 Identities = 181/222 (82%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || ||| || || |||| ||||| |||| | |||| Sbjct 164280 GTACTCATTCCAATTACAGGGCCTTGAAAAAGTCCCGTATTGTTATTTGTTGTTATTACC 164221 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| | || || | |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 164220 TCCCTGAGTTGGCAGTGGGTAATTTGCACGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 164161 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT-ACCATGG 178 ||||||||||| ||||| ||| | || |||| ||||||| ||||| | ||| ||||| | Sbjct 164160 TTCTCAGGCTCTCTCTCTGGAGTTGAGCCCTGATTCCCCATTACCAAT-GATGACCATAG 164102 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 ||||| || |||||||||||||||||||| || | ||| Sbjct 164101 TAGGCACATAAAGTACCATCGAAAGTTGATAGGCCAAACATT 164060 >seq190 Length=2708805 Score = 192 bits (212), Expect = 2e-46 Identities = 326/464 (70%), Gaps = 29/464 (6%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||| || | |||||| | || |||| ||| ||||||| | | || |||| ||||||| Sbjct 692294 ACTCGTTTCGATTACATGGCCTCAAAGGAGTCCTGTATTATTTTTCATTG---CTACCTC 692238 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | || |||| |||||||||||| |||||||| |||||||||||||||| || |||| Sbjct 692237 TCAGAGTTGGGAGTGGGTAATTTGCATGCCTGCTGTCTTCCTTGGATGTGGTGGCTGTTT 692178 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCT-AATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||| ||||| ||||||| ||||||||||||||| | ||| ||||| Sbjct 692177 CTCAGGCTCCCTCTCTGGAATTGAACCCTGAATTCCCCGTTACCCACAGTCACCGTGGTA 692118 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC- 239 ||| || |||| ||||| |||||||||||| ||| ||||| || ||| | Sbjct 692117 GGCACATAAAGTACCGCTGAAAGGTGATAGGGCAGACATTCAAATGAGAAATTGCCACCA 692058 Query 240 -TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAG----------CCC 286 ||||||| ||||| | | | |||| || | |||| ||| | Sbjct 692057 TGGAAGGCCA-GCGATCTGCTCGAGATTATCTAGAGTTGCCAAAGAGGCTGGGGCAATCT 691999 Query 287 CGAAGGG------CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-AGTCGGGGTT 339 | |||| | | |||||| | | |||||| || | | || | | | | || Sbjct 691998 TGGAGGGACAGCACATGGGTTTTGAGTTTCATAAATGCATGCATACCCATATACAGTATT 691939 Query 340 TTTAGCATGTAT-TAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAA 397 |||||||| || |||||||| |||| ||| |||| ||| | | | ||||| Sbjct 691938 CAATGCATGTATGCAGAGCTAGAATTGCCACAGTTGTCCAAGTAACAGATGAGTGATCAA 691879 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA 441 | ||| |||||||||| |||||| ||| |||||||||||||| Sbjct 691878 AGGAACCATAACTGATTAAATGAGTAATTTGCAGTTTCACTGTA 691835 >seq1646 Length=871298 Score = 176 bits (194), Expect = 1e-41 Identities = 152/185 (82%), Gaps = 5/185 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||| ||||||||||| | || | || ||| ||||||| ||||| | |||||||| Sbjct 688036 GTACTCGTTCCAATTACACGGCCTCGAATGAGTCCTGTAT---TATTTTTAATCACTACC 688092 Query 60 TCCCCGTGTCGG-GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||||| | | || |||||||||||| ||||| |||||||||||||||||||||||| Sbjct 688093 TCCCCAAGAAAGAGAGTGGGTAATTTGCACGCCTTCTGCCTTCCTTGGATGTGGTAGCCA 688152 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||||||||||||||||||| ||||||||||| | ||||| ||||||| | |||||| Sbjct 688153 TTTCTCAGGCTCCCTCTCCGAAATCGAACCCTGAATCCCCACTACCCGTGGTCACCATGA 688212 Query 179 TAGGC 183 | ||| Sbjct 688213 TTGGC 688217 >seq60 Length=567914 Score = 158 bits (174), Expect = 4e-36 Identities = 150/189 (79%), Gaps = 7/189 (4%) Strand=Plus/Minus Query 54 ACTACCTCCCCGTGTCGGGATTGGGTA---ATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110 ||||||||| || ||||||| |||||| |||||||| |||| |||||||||||||||| Sbjct 505420 ACTACCTCCACGAGTCGGGAGTGGGTAGCAATTTGCGCACCTGGTGCCTTCCTTGGATGT 505361 Query 111 GGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGA 170 |||||| || |||| ||||||| ||| |||| |||||| |||||| ||| ||||| | Sbjct 505360 GGTAGCTGTATCTCCTGCTCCCTATCCAGAATTCAACCCTGATTCCCAGTTGCCCGTGGC 505301 Query 171 TACCATGGTAG--GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAA 228 |||| || || || ||| |||||| ||||||||||||||||| | | |||||| Sbjct 505300 CACCACGGCAGATGCATAAATC--ACCATCAAAAGTTGATAGGGCAGACACTGGAATGAG 505243 Query 229 CCATCGCCG 237 | |||||| Sbjct 505242 ACGTCGCCG 505234 >seq541 Length=2265278 Score = 152 bits (168), Expect = 2e-34 Identities = 139/172 (81%), Gaps = 19/172 (11%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA----CTATCA 396 || ||||||||||||||||||||| |||| |||||||| ||||| | | | |||| Sbjct 1117710 TTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCA---AGTAACGGATGAGCGATCA 1117654 Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456 || ||| ||||||||||||||||||||||||||||||||||| || | |||| Sbjct 1117653 AAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTG-------CGCGTGTACT 1117601 Query 457 TAGACATGCATGG---CTTAATC-TTTGAGACAAGCATATGACTACTGGCAG 504 || || ||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct 1117600 TACACCTGCATGGCTTCTTAATCTTTTGAGACAAGCATATGA-TACTGGCAG 1117550 >seq1620 Length=1635318 Score = 149 bits (164), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||| ||||||||| | || |||||||| |||| | ||||| | |||||||||| Sbjct 1524565 ACTCAT-CCAATTACAGGGCCTCAAAAGAGTACTGTGTTGTTATTTTTCATCACTACCTC 1524507 Query 62 CCCGTGTCGGG--ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 || | || ||| | |||||||||||| | ||||||||| | |||||| |||||||| | Sbjct 1524506 CCTGAGTTGGGGGAGTGGGTAATTTGCACACCTGCTGCCCTACTTGGACCTGGTAGCCAT 1524447 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||| ||||| | |||| |||| || |||| || | |||| | | ||||| || Sbjct 1524446 TTCTCAGGCTTCCTCTACAGAATTGAACTCTGATTCTCCATAACCCATGAACACCATAGT 1524387 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCA 214 |||| || | |||| ||| ||||| ||||| Sbjct 1524386 AGGCATATAAAGCAGCATCAAAATTTGATTGGGCA 1524352 >seq244 Length=6775444 Score = 147 bits (162), Expect = 7e-33 Identities = 313/464 (67%), Gaps = 60/464 (13%) Strand=Plus/Plus Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 || || | ||||||| ||| |||||||| | | ||||||||||||||||||||||||| Sbjct 2927876 CTTCCTGAGTCGGGAGTGGATAATTTGCACAGCCGCTGCCTTCCTTGGATGTGGTAGCCA 2927935 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT-CCCCGTTACCCGTTGATACCATG 177 ||||||| ||||||||||||||||| | | || ||| ||||||||||||| Sbjct 2927936 TTTCTCAAGCTCCCTCTCCGGAATCAATCTCTGATTCCCCCGTTACCCGT---------- 2927985 Query 178 GTAGGCCAC-TATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC--G 234 || ||| || ||||| |||||||||||||| ||| || ||||| |||| | Sbjct 2927986 ---GGGCACATAAAGTACCACTGAAAGTTGATAGGGTAGACCTTCAGATGAAACATCATG 2928042 Query 235 CCGGCTCAAGGCCATGCGATTCG-TTAAG-TTATTATGAATCACCA---------AGGAG 283 | | | ||||| | ||| | || || | || |||||| || || | Sbjct 2928043 GCAACAGAGGGCCA-GTGATCAGCTTGAGATAATCCAGAATCATCAGCGTGGCTCTGGTG 2928101 Query 284 CCCC-----GAAGGG--------CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA 330 |||| |||| | | ||||| ||| |||||||||||| || | Sbjct 2928102 CCCCCCCCTACAGGGATACTTCACATGAGTTTTGGGTCTGATAAATACACCCACACCCA- 2928160 Query 331 GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGT-AAGGT 389 | | || | | |||||||||||||||| |||| ||||||| ||| | | | Sbjct 2928161 ---GCACTCATTTCCTTTTATTAGCTCTAGAATTGCCACAGTTATCCGAGTAATGGATGG 2928217 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 | |||||| ||| |||| |||||| ||| ||||||||||||||||||||| || Sbjct 2928218 GCAATCAAAGAAAACATAAGTGATTTCATGTGCCATTCGCAGTTTCACTGTACTGA---- 2928273 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493 | ||| | | ||||||||||||||||||||||| Sbjct 2928274 --------CCAGATG-TTTGTTTAATCTTTGAGACAAGCATATG 2928308 >seq385 Length=2585317 Score = 145 bits (160), Expect = 2e-32 Identities = 143/181 (79%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 4 CTCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||||||| || || | || |||| ||||| | | ||| |||||||| |||| Sbjct 1120065 CTCATTCCAATTGCAGAGCCTCAGAAGAATTGTGTATTATTTTTT--TGTCACTAGCTCC 1120122 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| |||| || |||||||| |||||||||||||||| |||| |||||| |||| Sbjct 1120123 CCGAACTGGGAGTGCATAATTTGCATGCCTGCTGCCTTCCTTTGATGAGGTAGCTTTTTC 1120182 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||||||||||| |||| ||||||| |||||| |||| || || | ||||||||| Sbjct 1120183 TCAGGCTCCCTCTCCAGAATTGAACCCTGATTCCCTGTTAACC-ATGGTCACATGGTAGG 1120241 Query 183 C 183 | Sbjct 1120242 C 1120242 >seq1357 Length=1100848 Score = 140 bits (154), Expect = 1e-30 Identities = 144/187 (77%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 34 CTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTG 93 |||||| ||||| | ||||||||| |||| ||||||| |||||| | ||| || ||| Sbjct 390455 CTGTATTGTTATTTTTCGTCACTACCATCCCGAGTCGGGAGTGGGTAGTGTGCACGACTG 390396 Query 94 CTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAAT 153 |||| |||||||||||| | |||||||||||| ||| ||| ||||| ||||| || Sbjct 390395 CTGCATTCCTTGGATGTAGGAGCCGTTTCTCACGCT-AGAATCCAGAATCACACCCTGAT 390337 Query 154 TCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGC 213 |||| |||||| || | ||||||| |||| || ||||||| ||| ||| ||||| Sbjct 390336 TCCCTGTTACCTGTGGTCACCATGGCAGGCACATACAGTACCATCAAAATATGAGAGGGC 390277 Query 214 AGAAATT 220 ||| ||| Sbjct 390276 AGACATT 390270 >seq489 Length=4770292 Score = 131 bits (144), Expect = 5e-28 Identities = 108/129 (84%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| | || |||||||| ||||||| ||||| | | ||| ||| Sbjct 329545 TACTCATTCCAATTACAGGGCCTCAAAAGAGTCCTGTATTGTTATTTTTCATGACTCCCT 329486 Query 61 CCCC-GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||| | ||| ||| |||||||||||| |||| ||| |||||||||||||||||||||| Sbjct 329485 TCCCTGAGTCAGGAGTGGGTAATTTGCATGCCTCCTGTCTTCCTTGGATGTGGTAGCCGT 329426 Query 120 TTCTCAGGC 128 ||||||||| Sbjct 329425 TTCTCAGGC 329417 >seq40 Length=1027554 Score = 131 bits (144), Expect = 5e-28 Identities = 92/104 (88%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| |||| ||||||||||||||||||| |||||||||||| | ||| | |||||||| Sbjct 574068 AACCATAATTGATTTAATGAGCCATTCGTAGTTTCACTGTACCGGCTGCGTGTACTTAGA 574127 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||| ||| |||||| Sbjct 574128 CCTGCATGGCTTAATCTTTGAGACAAGCATATG-CTATTGGCAG 574170 >seq984 Length=444050 Score = 120 bits (132), Expect = 9e-25 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 107 ATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCG 166 |||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||| | Sbjct 437097 ATGTGGTAGCTGTTTCTCAGGCTCCCTCTCCGGAATCAAACCCAGATTCCCTGTTACCTG 437156 Query 167 TTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226 | | |||||||||||| || |||||| ||||||| ||||| ||| ||| |||| Sbjct 437157 TGGTCACCATGGTAGGCACGTAAAGTACCATTAAAAGTTGGTAGGGTAGACATTCAAATG 437216 Query 227 A 227 | Sbjct 437217 A 437217 >seq1230 Length=669128 Score = 116 bits (128), Expect = 1e-23 Identities = 108/136 (79%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||| ||||| | || |||||| |||| || ||||| | | |||||| Sbjct 379523 GTACTCATTCCAGTTACAGGGCCTTGAAAGAGTCCTGCATTGTTATTTTTCATTACTACC 379464 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 ||||||||| | | | ||||||||||| | || ||||||||||| |||||| ||| | Sbjct 379463 TCCCCGTGTAAGAAATTGGTAATTTGCGTGGTTGTTGCCTTCCTTGAATGTGGAAGCTAT 379404 Query 120 TTCTCAGGCTCCCTCT 135 |||||||||||||||| Sbjct 379403 TTCTCAGGCTCCCTCT 379388 >seq474 Length=625456 Score = 116 bits (128), Expect = 1e-23 Identities = 167/237 (70%), Gaps = 19/237 (8%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||| ||||||| | || | |||||| || || ||||| | ||| |||| Sbjct 250849 GTACTCATTCTAATTACAGGGCCTCGAAAGAGTCCCACATTGTTATTTTTCATCAGTACC 250908 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| || |||| |||||| ||| ||||||| || | | Sbjct 250909 TCCCCGAGTTGGGAGAGGGTAACCTGCATGCCTGCTC-----------------AGAC-T 250950 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||| |||||| || |||||| ||||||||||||||||||||| | | |||||||| Sbjct 250951 TTCTCAGACTCCCTGTCTGGAATCAAACCCTAATTCCCCGTTACCCATGGTCACCATGGT 251010 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 || | | || |||| ||||| ||| ||||| |||| |||||| |||||| Sbjct 251011 AGTCACATGAAGTATCATCAGAAGTTTATAAAGCAGACATTTCAATGAAATATCGCC 251067 >seq409 Length=417794 Score = 105 bits (116), Expect = 2e-20 Identities = 85/100 (85%), Gaps = 7/100 (7%) Strand=Plus/Plus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 |||||||||||||||||||||| |||||||||||||| ||| | | | || || Sbjct 255907 ATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTA---CCTGCCT---CATGTACTTG 255960 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| |||||||||| Sbjct 255961 CATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 255999 >seq1189 Length=365312 Score = 104 bits (114), Expect = 7e-20 Identities = 135/185 (73%), Gaps = 15/185 (8%) Strand=Plus/Minus Query 105 GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164 |||||||||||| |||||||| |||||||||||| ||| |||||| |||||| Sbjct 22929 GGATGTGGTAGCTGTTTCTCATGCTCCCTCTCCGTAATTGAACCCAGATTCCC------- 22877 Query 165 CGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224 || |||||||||||| || ||||| |||||||||||||||||| ||| ||| Sbjct 22876 ---TGTCACCATGGTAGGCACGTAAAGTACCACTGAAAGTTGATAGGGCAGACATTCGAA 22820 Query 225 TGAACCATCGCCGGCTC--AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAG 280 ||| | || ||| | | | ||||| ||||| | | | ||||| || ||||||| Sbjct 22819 TGAGACGTCACCGCCACGGAGGGCCA-GCGATCGGCTCGAGGTTATCTAGAGTCACCAAA 22761 Query 281 GAGCC 285 |||| Sbjct 22760 CAGCC 22756 >seq1817 Length=85461 Score = 102 bits (112), Expect = 2e-19 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Minus Query 424 ATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGA 483 |||||||||||||||||| | || | ||||||||| ||||||||||||||||||||| Sbjct 59155 ATTCGCAGTTTCACTGTACCGGCCGCGTGTACTTAGACCTGCATGGCTTAATCTTTGAGA 59096 Query 484 CAAGCATATGACTACTGGCAG 504 |||||||||| |||||||||| Sbjct 59095 CAAGCATATG-CTACTGGCAG 59076 >seq319 Length=676790 Score = 87.8 bits (96), Expect = 5e-15 Identities = 76/90 (84%), Gaps = 7/90 (8%) Strand=Plus/Plus Query 418 TGAG-CCATTCGCAGTTTCAC----TGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 |||| |||||| ||||||||| |||| ||| || | |||| |||| |||||||||| Sbjct 157113 TGAGACCATTCACAGTTTCACCAGCTGTACTGAT-GCATGTACTCAGACCTGCATGGCTT 157171 Query 473 AATCTTTGAGACAAGCATATGACTACTGGC 502 ||||||||||||||||||||| |||||||| Sbjct 157172 AATCTTTGAGACAAGCATATG-CTACTGGC 157200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510299754752