Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq440983 149 3e-33 seq162973 107 8e-21 seq10709 104 1e-19 >seq440983 Length=7751 Score = 149 bits (164), Expect = 3e-33 Identities = 102/115 (89%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 4703 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 4762 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 4763 GGTCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4817 Score = 131 bits (144), Expect = 7e-28 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 3832 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 3891 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 3892 ACCGGCACGAGACCGATAGTCGACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 3951 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||||| ||| || || Sbjct 3952 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 3991 >seq162973 Length=227 Score = 107 bits (118), Expect = 8e-21 Identities = 92/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||| ||| |||||||| |||| ||| |||| |||||||||||||||| |||||| Sbjct 209 GGACCCAAAAAATGGTGAAATATGTCTGGGCAGGGCGAAGCCAGAGGAAACT--GGTGGA 152 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || |||| |||| ||| ||||||||||| | ||| | ||||||||||||| Sbjct 151 GGTCCGCAACGGTCCTGACGTGCAAATCGGTTGTCCGACCTGGGTATAGGGGC 99 >seq10709 Length=15695 Score = 104 bits (114), Expect = 1e-19 Identities = 117/157 (75%), Gaps = 5/157 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| || | | ||||| ||||||| Sbjct 1152 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGG-----TCCATCTAAGGCTAAAT 1206 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| |||||| |||| ||||||| | | ||||| ||||||| |||||| | Sbjct 1207 ACTGGCAGGAGACCAATAGTCGACAAGTACCATAAGGGAAAGTTGAAAAGAACTTTGAAG 1266 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||||| || | ||||||| ||||| ||| || Sbjct 1267 AGAGAGTTCAAGACGGCGTGAAAACGTTGAGAGGTAA 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2069250375400