Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq440983 594 2e-167 seq10709 288 3e-75 >seq440983 Length=7751 Score = 594 bits (658), Expect = 2e-167 Identities = 460/541 (85%), Gaps = 16/541 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 6861 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 6802 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 6801 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 6742 Query 127 G-GCCCG---CGAA---GGACCTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTT-- 174 | ||||| ||| || ||| ||||||||| | | || | | | | Sbjct 6741 GCGCCCGGGGCGAGCCGGGCGCTTGACGCCAGAAGCGAGAGCCCGCTCGGGGCTCGCCTC 6682 Query 175 -CCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAA 232 |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| |||| Sbjct 6681 CCCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAG 6622 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | |||||||||||||||||||||||| ||| |||||| | | |||||||||||||| Sbjct 6621 GC--CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGC 6564 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 6563 TCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 6504 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6503 CTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTA 6444 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6443 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 6384 Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 6383 TTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAAC 6324 Query 533 A 533 | Sbjct 6323 A 6323 >seq10709 Length=15695 Score = 288 bits (318), Expect = 3e-75 Identities = 335/442 (76%), Gaps = 29/442 (7%) Strand=Plus/Minus Query 4 GATCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTT 63 || ||| || || || |||| ||||||| |||| |||| | |||||||||| | | ||| Sbjct 8415 GACCTTCTGTTCAACGGGAGTTTTCTGTCCTCCCTGAGCTCGCCTTAGGACAGCAGTGTT 8356 Query 64 ATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGG 123 | |||| |||| ||| | ||||||| ||||||||||||||| || |||| || | | || Sbjct 8355 ACCGTTTGACAGGTGTACTGCCCCAGTCAAACTCCCCACCTGCCATTGTCCTCGAGCGGG 8296 Query 124 ATCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCG-CTTCA 182 ||| | || ||| || ||| | | || | || | ||| | ||| Sbjct 8295 T--------CGACG--CCATAA-GCAAGAGCCCGCTTGGGGCTCGCC--TCCCGGCCTCA 8249 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTCCC 241 || ||||| ||||||| ||||| ||||||||||||||| ||| |||| | ||||| Sbjct 8248 CTGGGTAAGTGAAAAAACAATAAGAGTAGTGGTATTTCACCGGCGGCCGAGGC--CTCCC 8191 Query 242 ACTTATTCTACACCTCTCAAGTCAT-----TTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||| || |||| |||||| | | |||||||||||||||||| Sbjct 8190 ACTTATTCTACACCTGTCTCTTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAA 8131 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || Sbjct 8130 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCACAAG 8071 Query 357 ATAGTAGATAGGGACAGTGG---GAATCTCGTTAAT-CCATTCATGCGC--GTCACTAAT 410 ||||||| |||||||| ||| |||| | ||| |||| | | | | ||||||| Sbjct 8070 ATAGTAGGTAGGGACACTGGCATGAAT-GGATGAATGAGATTCCTACTCATGCCACTAAT 8012 Query 411 TAGATGACGAGGCATTTGGCTA 432 | |||||||||||||||||||| Sbjct 8011 TCGATGACGAGGCATTTGGCTA 7990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1627005227904