Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20anguilla_20[genbank_20GCA_5F000695075.1_202014-05-20] 501,148 sequences; 1,018,701,900 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq440983 434 3e-119 seq271098 190 6e-46 seq5286 118 3e-24 >seq440983 Length=7751 Score = 434 bits (480), Expect = 3e-119 Identities = 420/529 (79%), Gaps = 27/529 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 1244 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 1185 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1184 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1125 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 1124 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 1065 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| |||||| | || ||| | Sbjct 1064 AGGCGCAGAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCACCGCC 1005 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGC-CCCG 288 | ||| | |||||| | | ||||| || ||||||| || || | || Sbjct 1004 ACGGAGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCGCACG 945 Query 289 AAG-----GGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGA-AGTC-GGGG 337 | | | | |||||| ||| |||||| ||| ||| | || ||| | | Sbjct 944 AGGCACCCCGGATGGGTTTTGGGTCTGATAAATGCACGCATCCCCTGGGAGGGTCAGCGC 885 Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATC 395 | | ||||||||||||||||||||| |||| |||||||| ||| || || | ||| Sbjct 884 TCGTCGGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGT-TGGAGCGATC 826 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 ||| ||| ||||||||||||||||||||||||||||||||||||| | | | ||| Sbjct 825 AAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTAC 766 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 765 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 718 >seq271098 Length=3237 Score = 190 bits (210), Expect = 6e-46 Identities = 176/222 (79%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 7 ATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65 |||||||||||| | || ||||| | | || | ||||| | |||||||||||||| Sbjct 282 ATTCCAATTACAGGGCCTCAAAATAATCATGCGTTGTTATTTCTCGTCACTACCTCCCCA 341 Query 66 TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125 ||| ||| ||||||| |||||||||| || |||| |||||||||||||||| ||||||| Sbjct 342 AGTCAGGAGTGGGTAAATTGCGCGCCTACTACCTTACTTGGATGTGGTAGCCATTTCTCA 401 Query 126 GGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCA 185 |||||||| ||| ||||| |||||| |||||||||||||| | | |||||||||||| Sbjct 402 GGCTCCCTTTCCAGAATCAAACCCTGATTCCCCGTTACCCATAGTCACCATGGTAGGCAT 461 Query 186 CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 ||||| ||| ||| |||||||||| || |||||| Sbjct 462 GGGAATTACCAATGAAGGTTCATAGGGCAGATGTTCGAATGA 503 >seq5286 Length=57311 Score = 118 bits (130), Expect = 3e-24 Identities = 87/100 (87%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 |||||||||||||| | ||||| ||||||||| |||| | | | |||||||||||| Sbjct 13146 ATAACTGATTTAATAAACCATTTGCAGTTTCAGTGTACCGGCCGTGTGTACTTAGACATG 13087 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| |||||||||| Sbjct 13086 CATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 13048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1502830660608